Kitasatospora sp. MMS16-BH015: CFP65_5277
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Entry
CFP65_5277 CDS
T05366
Name
(GenBank) Fis family transcriptional regulator
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
kit
Kitasatospora sp. MMS16-BH015
Brite
KEGG Orthology (KO) [BR:
kit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kit03016
]
CFP65_5277
Enzymes [BR:
kit01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CFP65_5277
Transfer RNA biogenesis [BR:
kit03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CFP65_5277
Prokaryotic type
tRNA splicing ligases
CFP65_5277
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AUG79986
LinkDB
All DBs
Position
6184496..6185689
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AA seq
397 aa
AA seq
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MSYTEVPGIRVPIRMWTDPATVEGAAMQQLRNISSLPWLHGLAVMPDVHLGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTTLTAKDLPDDLSRLRSKIEQIIPVGQGKHSDPVDPR
KLHGHPTAGWDDFWGRFDEVAPEVKWRRERAMQQMGTLGGGNHFIEVCVDTTGAVWLMLH
SGSRNIGKELAEHHMGVARSLPHNQGLVDRDLAVFIADTPQMGAYRQDLFWAQEYAKHNR
AIMMALFQDIVRREFPKAKVGFDSVISCHHNYVAEERYDGVDLLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVRGLGNADSFNSASHGAGRKMSRTAAKKRFTTSDLAEQTKGVECRKDPG
VVDEIPGAYKPIEKVIAQQKDLVEVVAQLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaccgaagttccgggcatccgggtgccgatccggatgtggacggatcccgcc
accgtcgagggcgcggccatgcagcagctgcgcaacatcagctcgctgccctggctgcac
ggcctggccgtgatgccggacgtgcacctgggcaagggcgcgaccgtcggctcggtgatc
gcgatgcgcggcgccgtctgcccggccgccgtcggcgtggacatcggctgcgggatgagc
gcggtgaagaccacgctcaccgcgaaggacctgcccgacgacctctcccggctgcgctcg
aagatcgagcagatcatcccggtcggccagggcaagcacagcgacccggtcgacccgcgc
aagctccacggtcaccccaccgccggttgggacgacttctgggggcgcttcgacgaggtc
gccccggaggtgaagtggcggcgcgagcgggccatgcagcagatgggcacgctgggcggc
ggcaaccacttcatcgaggtctgcgtcgacaccaccggcgcggtctggctgatgctgcac
tccggttcgcgcaacatcggcaaggagctggccgagcaccacatgggcgtggcccgctcg
ctcccgcacaaccagggcctggtcgaccgcgacctcgcggtcttcatcgcggacaccccg
cagatgggcgcctaccggcaggacctgttctgggcgcaggagtacgccaagcacaaccgc
gcgatcatgatggccctgttccaggacatcgtccgccgcgagtttccgaaggccaaggtc
ggcttcgattccgtcatcagctgccaccacaactacgtggcggaggagcggtacgacggc
gtcgacctgctggtcacccgcaagggcgcgatccgggccggttccggtgagtacgggatc
atcccgggctcgatgggcaccggttcgtacatcgtccgcgggctgggcaacgccgactcg
ttcaactccgcctcgcacggcgcgggccgcaagatgagccgcaccgcggccaagaagcgg
ttcacgacgagcgacctggcggagcagaccaagggcgtcgagtgccgcaaggaccccggc
gtggtcgacgagatccccggcgcgtacaagccgatcgagaaggtcatcgcccagcagaag
gacctggtcgaggtggtcgcccagctgaagcaggtggtctgcgtcaagggctga
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