Kingella kingae: KKKWG1_0062
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Entry
KKKWG1_0062 CDS
T04151
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
kki
Kingella kingae
Brite
KEGG Orthology (KO) [BR:
kki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kki03009
]
KKKWG1_0062 (rlmD)
Enzymes [BR:
kki01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KKKWG1_0062 (rlmD)
Ribosome biogenesis [BR:
kki03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KKKWG1_0062 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Methyltransf_15
MTS
Methyltr_RsmB-F
Methyltransf_11
TRM5-TYW2_MTfase
PCMT
Methyltransf_23
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
CRZ19238
LinkDB
All DBs
Position
I:54795..56096
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AA seq
433 aa
AA seq
DB search
MQTIIHSLDYEGRGVARVDGKTIFVENALPLEVADIAIMQDKGSFALAHAQRIVQSSPYR
REPACPHYGDCGGCALQHLEFSAQVAAKQRVFEEQLQRIGKVQPEQLLPPIYGSAWHYRS
RTRLAISLDWAGEVQIGYQAKRSKKIVPISQCAVLPERISSSLHTIRAGLQAIHRAAPKI
RMQHVDILAGDHITVLNIAADKPLPANEVAQMQSSLQSQGKWQIWQQIGKRPAQAIAPKT
APELSYALPEFGLHMPFRVGDFTQINLPMNEVMVSRAIRLLQPQAHERIADLFCGLGNFT
LPIARSGAQVIGIEGVDFLTQRATHNAQQNGLHNIEFSTADLFDTTPQTIEQLGYFNKML
LDPPRAGAYAVVQALHAPYLPKRIVYVSCNPATFARDAAVLVGKGYRFSAAGIMNLFPHT
AHVEAMAVFDLNG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccattattcattctcttgactacgaagggcgcggtgtggcgcgtgtggacggc
aaaacgatttttgtggaaaacgcgctgccgttggaagtcgccgacatcgccatcatgcaa
gacaaaggcagttttgcccttgcccacgcgcaacgcattgtgcagtcatcgccctatcgc
cgtgaaccagcatgtccgcattatggcgattgcggcggctgtgccctgcaacacttggaa
tttagcgcacaagtggcggcaaaacagcgcgtgtttgaagaacaactgcaacgcatcggc
aaagtgcagcccgaacaattattgccgccaatctacggctcggcgtggcattatcgcagc
cgcacgcgcttggcgatttcgctggattgggctggcgaagtgcaaatcggttatcaagcc
aaacgcagcaaaaaaatcgtgccaatttcgcaatgcgcggtgctgcccgaacgcatttca
agcagcctgcacacgattcgcgctggtttgcaagcgattcatcgtgctgcgcccaaaatt
cgtatgcagcatgtggatattttggctggcgaccacatcacggtgttgaacattgctgcc
gataaacctttgccagccaacgaagtcgcccaaatgcaaagcagcctgcaatcgcaaggc
aaatggcaaatttggcagcaaattggtaaacgcccagcacaagccatcgccccaaaaacc
gcgcccgaattgagctacgcgctgcccgaatttggcttacacatgccgtttcgcgtgggc
gatttcacgcagattaacttgccgatgaacgaagtcatggtctctcgcgccatacgcctg
ctgcaaccgcaagcacacgaacgcattgccgatttattttgcggattgggcaactttacg
ctgccgattgcacgcagcggcgcacaagtcatcggcatagaaggcgtggactttttaacg
caacgcgccacgcacaacgcgcaacaaaacggtttgcacaatattgaattttctacagcg
gatttgtttgacaccacgccacaaaccattgaacaactgggttattttaacaaaatgctg
cttgacccgccacgcgcaggggcgtatgcggtggtgcaggctttgcatgcgccgtatttg
cccaagcggattgtgtatgtgtcgtgcaaccctgctacgtttgcgcgagatgcggcggtg
ctggtgggcaagggctatcggtttagcgcggctggaattatgaatttgtttccgcacacg
gcgcatgtggaagcgatggcggtgtttgatttaaatgggtga
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