Kingella kingae: KKKWG1_0394
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Entry
KKKWG1_0394 CDS
T04151
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' chain (Transcriptase beta' chain) (RNA polymerase beta' subunit)
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kki
Kingella kingae
Pathway
kki03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kki00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KKKWG1_0394 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kki03021
]
KKKWG1_0394 (rpoC)
03400 DNA repair and recombination proteins [BR:
kki03400
]
KKKWG1_0394 (rpoC)
Enzymes [BR:
kki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KKKWG1_0394 (rpoC)
Transcription machinery [BR:
kki03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KKKWG1_0394 (rpoC)
DNA repair and recombination proteins [BR:
kki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KKKWG1_0394 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
DUF7129
Motif
Other DBs
NCBI-ProteinID:
CRZ19569
LinkDB
All DBs
Position
I:361472..365659
Genome browser
AA seq
1395 aa
AA seq
DB search
MNLTDLFAPLQQAGSEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFCA
KIFGPVKDYECLCGKYKRLKYKGVTCEKCGVEVTLIKVRRERMGHIELAAPVAHIWFLKS
LPSRLGMVLDMTLRDIERVLYFEAFVVTDPGLTSLQRRQLLTEEDYYAKLEEYGEEFDAH
MGAEGVRELLRSLNVEQEIETLRQELQSTSSDTKIKKIAKRLKVLEAFQRSGMKLEWMIM
DVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELRAPDIIVRNEKRML
QEAVDSLLDNGRRGKAMTGASKRPLKSLSDMIKGKSGRFRQNLLGKRVDYSGRSVITVGP
YLRLHQCGLPKKMALELFKPFIFHKLEKRELATTVKAAKKLVEQEVPEVWDILEEVIREH
PILLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME
ARTLMLASNNVLAPANGEPIIVPSQDIVLGLYYMTRDKINAKGEGTLFADVKEVHRAYHT
KQVELGTKITVRLREWVKNEAGEFEPVIKRYNTTVGRALLSEILPKGLPFSYIDTALKKK
AISKLINASFRLCGLRDTVIFADHLMYTGFALAAKGGISICVDDMEIPKEKPALLAEANA
EVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSTQKVIDREGKEVDQESF
NSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITANFREGLTVLQYFIATHGA
RKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSEGFSMKAVVQGGDIIEPLRDRI
LGRVTATDVIDPSTGSTLIEAGTMLDEKLVDLIDNSGVDEVKVRTPITCQTRYGLCAKCY
GRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTVR
FNSQMRYIANNKGELIVIGRSCEIVILDAAGRERELHKIPYGATLKVQDGEELKAGTTLA
TWDPHTHPMITEHAGRVEFENVEEGVTVTRQVDDVTGLSTLVVIDGKRRGSTSKLLRPTV
KLLDKNGEPVMIPGTDTPVSMAFQVGAIIQVREGQEIGKGDVLARIPQASTKTRDITGGL
PRVAELFEARVPKDAGMLAEVTGTVSFGKETKGKQRLVITDLDGVAYETLISKEKQLLVH
DGQVVNRGETVVDGAVDPHDILRLQGIEALTRYIVQEVQEVYRLQGVKISDKHIEVIIRQ
MLRRVNIVDAGDTNFITGEQVERAEVMIANEQAIAAGKEPARFENVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGRKDDLRGLKENVIVGRLIPAGTGLSYHRSRRAAWAAQRSA
DAVANQPAADEQQDA
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaccgatttattcgcccccctgcaacaagcaggttcagaagaatttgatgcc
attaaaattggcatcgcgtcgccagagacaatccgctcatggtcttacggcgaagtgaaa
aaacccgaaacgattaactatcgcacattcaaaccagaacgcgacggcttgttttgcgcc
aaaattttcggtccagttaaagactacgaatgcttgtgcggcaaatacaaacgcttgaaa
tacaaaggcgttacctgtgaaaaatgtggcgtagaagttaccctgatcaaagttcgtcgc
gagcgcatgggtcatattgaattggctgcgcctgttgcccacatttggtttttgaaatca
ttgccaagccgtttgggtatggtgttggacatgactttgcgcgatattgagcgtgtgttg
tattttgaagcatttgtggtaactgacccaggtttaaccagcctgcaacgtcgccaatta
ttgaccgaagaagattactacgccaaattagaagaatatggcgaagaatttgatgcacac
atgggtgccgaaggcgtgcgtgaattgttacgcagcctgaatgtggaacaagaaattgaa
actttgcgccaagaattgcaatcaaccagcagcgacaccaaaatcaaaaaaatcgctaaa
cgtttgaaagtattggaagcattccaacgctctggcatgaaattagagtggatgattatg
gacgtgttgccagtcttgccgcctgatttgcgcccactcgtgccattggacggcggacgt
tttgccacttctgatttgaacgatttgtatcgccgcgtgattaaccgtaacaaccgtttg
aaacgcttgttggaattgcgcgcgcctgacatcatcgtccgcaatgaaaaacgtatgttg
caagaagcggttgatagcttgttggacaatggtcgtcgtggtaaagcgatgactggcgca
agcaaacgcccattgaaatctttgtctgacatgattaaaggtaagagtggtcgtttccgt
caaaacttgctgggtaaacgtgtggactactctggtcgttctgtgattaccgtaggtcct
tacttgcgtttgcaccaatgtggtttgccgaaaaaaatggcgttggaattgttcaaaccg
tttattttccacaaattggaaaaacgcgaattggcaacaaccgttaaggcagctaaaaaa
ttggtagagcaagaagtgccagaagtttgggacatcttggaagaagtgattcgcgaacac
ccaattttgctgaaccgtgcgccaaccttgcaccgtttgggtattcaagcgtttgagccg
attttgattgaaggtaaagcgattcagttgcacccattggtgtgcgcggcgtttaacgcg
gactttgacggcgaccaaatggcggttcacgttccattgtctttggaagcgcaaatggaa
gcgcgtacgttgatgttggcatcaaacaacgtgttagcccctgcaaacggcgagccgatt
atcgtaccgtctcaagatattgtcttgggcttgtactacatgactcgcgacaaaatcaac
gcaaaaggtgaaggtacattgttcgccgatgtgaaagaagtacaccgtgcttaccacacc
aaacaagtggaattgggtacaaaaattaccgttcgcttgcgtgagtgggtgaaaaacgaa
gcaggcgaatttgagcctgtgattaaacgctacaacaccactgtgggtcgtgcgttgctg
tctgaaatcttgccaaaaggcttgccattcagctacatcgataccgcattgaagaaaaaa
gcaatttctaaattgattaacgcatcattccgcttgtgcggtttgcgcgatacagtgatt
tttgctgaccacttgatgtatacaggttttgcattggcagcgaaaggcggtatctccatt
tgcgttgatgatatggaaattccaaaagaaaaacctgcattgcttgccgaagcgaatgcc
gaagtaaaagaaatcgaagaccaataccgtcaaggtttggtaaccaacggcgaacgctac
aacaaagttgtggatatttggggtcgtgcaggcgataaaatcgccaaagccatgatggac
aacttgtctacgcaaaaagtgattgaccgcgaaggcaaagaagttgaccaagagtcgttc
aactcaatttacatgatggcggactctggtgcgcgtggttcggcagcacagattaaacag
ttgtctggtatgcgtggtttgatggcaaaacctgacggctcgattatcgaaacgcccatt
actgcgaactttcgcgagggtttgacggtattgcaatactttattgcgacacacggtgcg
cgtaaaggtttggcggatacggcattgaaaacagcgaactctggttacttgactcgccgt
ttggtggacgtaacacaagacttggtagtggttgaagacgattgcggcacatcagaaggt
ttctcaatgaaagccgtggtacaaggcggcgatattattgagccattgcgtgaccgtatt
ttgggtcgtgtaaccgcaaccgatgtgattgacccaagcacaggcagcacattgattgaa
gctggcacaatgctggacgaaaaactggttgatttgattgacaactctggcgtggacgaa
gtgaaagtccgcacaccaatcacttgccaaacacgttatggcttgtgcgcaaaatgttat
ggtcgcgacttggcacgcggtaaattggtgaacgcaggtgaagcagtcggcgtaatcgca
gcgcaatcgattggtgaaccaggtacacagctgacaatgcgtacgttccacattggtggt
gcggcatctcgtgctgcagcagccagccaagtagaagcaaaatcaaacggtacggttcgc
ttcaacagccaaatgcgttacatcgccaacaacaaaggcgaattgattgtgattggtcgc
tcttgcgaaatcgtgattttggacgcagcaggtcgcgaacgtgaattgcacaaaatccct
tacggtgcaacgctgaaagtacaagatggtgaagagttgaaagcaggcacaacgctggca
acttgggacccgcatacgcacccaatgattaccgaacacgcaggtcgtgtggagtttgaa
aatgtggaagaaggtgtaaccgttacccgtcaagtggacgacgtaacaggcttgtctact
ttggtggtgattgacggcaaacgtcgtggcagcaccagcaaattgttgcgcccaacggtt
aaattattggacaaaaatggcgagcctgtgatgattcctggcacagatacccctgtgtct
atggcgttccaagtaggcgcgattatccaagtacgtgaaggtcaagaaattggcaagggc
gatgtgttggcgcgtattccgcaagcatcaaccaaaacacgcgatattacgggtggtttg
ccgcgcgtagccgaattgtttgaagcgcgtgtgccaaaagacgcaggcatgcttgccgaa
gtaacaggtacagtttcatttggtaaagaaaccaaaggcaaacaacgcttggtgattacc
gatttggacggcgtggcatacgagactttgatttccaaagagaaacaactgttggtgcat
gatggtcaagtagtaaaccgtggcgaaaccgttgtggacggcgcggttgatccacacgac
atcttgcgcttgcaaggcattgaagctctgacacgctacatcgtgcaagaggttcaagag
gtttaccgcttacaaggtgtgaaaatttctgacaaacacattgaagtgattattcgccaa
atgttgcgccgcgtgaacatcgtggacgctggcgacaccaacttcattacaggcgaacaa
gtagaacgcgccgaagtgatgattgccaatgagcaagccatcgcagctggcaaagaacct
gctcgctttgaaaatgtgttgttgggtattaccaaagcgtctttgagtaccgacagcttc
atttctgcggcatcgttccaagaaaccacgcgcgtattgaccgaagctgccattatgggt
cgcaaagacgacttgcgcggcttgaaagaaaacgtgattgtgggtcgcttgattcctgcg
ggtacaggtttgagctatcatcgttcacgtcgtgcggcttgggcagcacaacgcagcgca
gatgcggttgctaaccaaccagcagcagacgaacaacaagacgcgtaa
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