Kingella kingae: KKKWG1_0599
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Entry
KKKWG1_0599 CDS
T04151
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kki
Kingella kingae
Pathway
kki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KKKWG1_0599 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kki03019
]
KKKWG1_0599 (rhlE)
Enzymes [BR:
kki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KKKWG1_0599 (rhlE)
Messenger RNA biogenesis [BR:
kki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KKKWG1_0599 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CRZ19773
LinkDB
All DBs
Position
I:562330..563754
Genome browser
AA seq
474 aa
AA seq
DB search
MGESVKIPILHIMQERRNMTQFSQLGLGQEIVSALSEQGYETPTPIQLTAIPKALAGHDL
LAAAQTGTGKTAAFMLPSLERLKRYANASTSPAMHPVRMLVLTPTRELADQIDQNTKSYI
KNLPLRHTVLFGGVSMDKQTADLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEAD
RMLDMGFVDEIRQIMRMLPKPRQTLLFSATFAPDIRKLAQDFMHLPETIEVAAQNTTNAN
VEQHVIAVDAHRKKELLERLIVDLNMPQVIVFCKTKQSADQVARDLLRRGLSANAIHGDK
SQQTRLEVLSQFKSGELRVLVATDVAARGLDIAELPFVINYELPVQAEDYVHRIGRTGRA
GAEGVAISMMDETEQKMYASIQELIGAQLPVSRIEGFEPRWEQVQAALHEQPSMSSPSAP
SSRTQRTERGEKRANQREAKRQVEKMVEVERNSVRRRGRERRTCALLQRNFGAI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatctgttaaaatccctatcctacatatcatgcaagaaagaaggaatatgact
caattttcacaattgggcttggggcaagaaattgtgtcggcattgtccgagcaaggctac
gaaacccccacgcccattcagttgacagccattccaaaagccttggcagggcacgattta
ttggcggctgcacaaacgggtacgggcaaaaccgccgcgtttatgttgcccagtttggag
cgtttgaagcgttatgccaatgccagcacatcgccagccatgcaccccgtgcgtatgttg
gttttgacaccaacgcgcgaactggctgaccaaatcgaccaaaatacgaaaagctacatc
aaaaatttgccgttgcgccacactgttttgtttggtggtgtgagcatggataagcaaacg
gcggatttgcgtgcaggctgcgaaattgtggtggcaacggttggacgcttgctcgaccat
gttaagcaaaaaaacatcaatttaaacaaagttgaaattgtggtgctggacgaagccgac
cgcatgctcgacatgggttttgttgatgaaatccgtcagattatgcgaatgttgcccaaa
ccgcgccaaactttattgttttcagcgacgtttgcgcccgatatccgcaaattggcgcag
gattttatgcatctgccagaaacgattgaagtggcagcacaaaacacgaccaatgctaat
gtggaacaacacgtgattgcggtagatgcacatcgcaaaaaagaattgttggagcgtttg
attgtggatttgaatatgccgcaagtgattgtgttctgcaaaaccaagcaatctgccgac
caagtggcgcgagatttgttgcgccgtggcttgtcggcaaatgctattcacggcgataaa
tcgcaacaaacgcgtttggaagtgttgagccagttcaaatcgggcgaattgcgtgttttg
gtggcaaccgatgtggcggcgcgtggtttggatattgccgaattgccttttgtgattaat
tacgaattgcctgttcaggcggaagattatgtgcatcgcattgggcggacagggcgcgca
ggcgcggaaggcgtggcgatttcgatgatggatgaaaccgagcaaaaaatgtatgcgtcc
attcaagagttgattggtgctcaattgcctgtttcgcgcattgaaggctttgaaccgcgt
tgggaacaagtgcaggctgctttgcatgaacagccgtcgatgtcgtctccctctgcgcca
tcttcgcgtacgcaacgtaccgaacgcggcgaaaaaagagccaaccagcgtgaagccaaa
cgacaagtagaaaaaatggttgaagtagagcgcaacagtgttcgccgtcgtggacgcgaa
cgccgaacgtgcgctttgttgcaacgtaattttggtgcgatttaa
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