Kangiella koreensis: Kkor_0417
Help
Entry
Kkor_0417 CDS
T00973
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kko
Kangiella koreensis
Pathway
kko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kkor_0417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kko03019
]
Kkor_0417
03009 Ribosome biogenesis [BR:
kko03009
]
Kkor_0417
Enzymes [BR:
kko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Kkor_0417
Messenger RNA biogenesis [BR:
kko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Kkor_0417
Ribosome biogenesis [BR:
kko03009
]
Prokaryotic type
rRNA helicases
Kkor_0417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
AAA_19
HEM4
DUF6702
Cas3-like_C_2
UvrA_inter
bCoV_SUD_C
Motif
Other DBs
NCBI-ProteinID:
ACV25837
UniProt:
C7R855
LinkDB
All DBs
Position
complement(437701..439497)
Genome browser
AA seq
598 aa
AA seq
DB search
MTQDQTITSFDELGLSPAVLKSIKQVGYEQPSPIQSASIPVLMAGKDIIGQAQTGTGKTA
AFALPMLSRLDAKDNNTQLLVLAPTRELAIQVAEACQSYAKNMPGLNVLPIYGGQKYDIQ
LRQLKRGAQIVVGTPGRVMDHIRRGTLKLDNLKALVLDEADEMLRMGFIDDVEWVLGHTP
KTRQIALFSATMPKEIKKVAEKYLHEPEHIKIQTKTSTATTINQRYWLVSGIHKLDALTR
VLETEEFDGMIIFVRTKIATTELADKLTARGFRAEALNGDIAQTTRERIVEKLKKGQIDI
LIATDVAARGLDVERISHVVNYDIPYDTESYVHRIGRTGRAGRSGNAILFVAHRERRMLK
AIERATNQPITEMQMPSIDNINEQRMSRFERKVLSTIENDDLSFFKQFITKLEEKTDTDP
QIIAAALAKLAGGDELILKELPKAKKERSERADRPERSDRRDRKGRDEGSKRSSDRSFSP
YAQPLKSHPDIEMERFKIEAGHSHNVKVSNIVGAIANEAEIDSEYIGRIDIFDEFTTVDL
PAGMPKEVLQILSKAYVAGRPMSLTVIGDQKASKGDSKFKGKDKGKPKSKAGKPKFKK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagatcaaaccattaccagttttgacgaactgggactttcgcctgccgtatta
aaatccattaaacaagttggctacgaacaaccttcaccgatccaaagcgccagcattcct
gtgcttatggctggtaaagacattattggtcaggcccagaccggtaccggtaaaacagca
gcttttgctttaccgatgctttccagattggatgcaaaggacaacaacacccaacttttg
gttttagctccaacacgcgagctcgccattcaggttgctgaagcctgccaaagttatgct
aaaaatatgccaggcttaaacgtattgccaatttatggcggtcaaaaatacgatattcag
ttacgtcaacttaagcgtggcgcgcaaatagtagtagggacacccggccgtgtgatggat
catattcgccgcggcacacttaaactcgacaatttaaaagcgctggtattggatgaagcc
gacgaaatgttacgcatgggctttattgatgacgttgaatgggtgttaggccatacgcct
aaaactcgccaaatcgcactattctccgcaaccatgccaaaagaaatcaaaaaagttgcc
gagaagtatttgcatgagcctgagcacatcaaaattcaaactaaaaccagtaccgcaacc
accattaatcagcgttattggttagttagcggtatacataagctggatgcgttaacacga
gttcttgaaaccgaagaattcgatggcatgatcattttcgtgcgcactaaaattgccacg
acagaacttgctgataaattgacggcgcgcggttttagagcagaagcattaaatggtgac
atcgctcagaccacacgcgagcgaatcgtagaaaaactgaagaagggtcaaatcgacatt
cttattgcaaccgacgttgctgcacgtggactggatgttgaacgcatcagtcacgttgtt
aactacgatattccctacgacaccgagtcttatgttcaccgtattggtcgaaccggccgt
gccggccgaagtggtaatgctattttattcgtagcacatcgcgaacgccgcatgctgaaa
gctatcgaacgcgctaccaaccaaccaataacagaaatgcagatgccgagtattgataat
atcaatgagcaacgcatgagccgtttcgagcgtaaggttttaagtactattgagaatgat
gatttaagtttctttaaacagtttattactaagctcgaagaaaaaacggatacagaccca
caaatcattgccgcagcattggctaaattagcgggtggcgatgagttaattcttaaagaa
cttccaaaagctaagaaagagcgcagtgaaagagcagatagacctgaaagaagtgataga
cgcgatcgcaaaggacgtgatgaaggctcaaagcgcagtagcgatagaagtttttcaccc
tacgcccaaccattaaagtctcatcctgatatcgaaatggaacgcttcaaaatcgaagca
ggccatagccataacgtcaaagtcagcaacatcgttggcgccatcgccaatgaagctgaa
atcgacagcgaatatattggccgtatcgacatcttcgacgaattcaccacagtcgatctt
ccagcaggcatgccaaaagaagtactacaaattctcagtaaagcatatgttgctggcagg
ccaatgagcttaaccgtaataggtgatcaaaaagccagtaaaggcgatagtaaatttaaa
ggaaaagataaaggcaagcccaagagtaaggccggcaaacctaaatttaaaaagtaa
DBGET
integrated database retrieval system
