Kangiella koreensis: Kkor_1398
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Entry
Kkor_1398 CDS
T00973
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kko
Kangiella koreensis
Brite
KEGG Orthology (KO) [BR:
kko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kko03016
]
Kkor_1398
Enzymes [BR:
kko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Kkor_1398
Transfer RNA biogenesis [BR:
kko03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Kkor_1398
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ACV26810
UniProt:
C7RC18
LinkDB
All DBs
Position
complement(1495341..1496495)
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AA seq
384 aa
AA seq
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MARFHLEQHQDSVHVETVSDPERLQELCQSWLALKELAVDTEFDRTNTYFHRLALIQIYD
GKEIYLIDPLAFDDLSALTELFASTSVVKALHSCSEDLEALYHQYGFEFNQVFDTQIAAS
LDGIGLSVGYGNIVEHFLSVVLDKEHTKTDWLQRPLSQEQRVYAAQDVQYLMPVYYRLRD
SLLEKGLFECVIEDVNSIFAAIIQADDYAEAYLKVKGAFRLNQFQLNRLQKLAQWRETLA
RDNNIPKTFVFRDHHLIEVSQKEKTSIGDLLSMGCHRGSIRKYGAEMIHQIELADQVDKE
QWPEPLQPFHKIPKSKAMFNALKAEVEKVANLNSIPAEALCNRRLIEYYIKMTLGFKGRP
NRFWNSWRQRLLEEPFKQAMQEFI
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttggcacgatttcatttagagcaacaccaagactcagttcatgttgaaactgtgtctgat
cctgaacgtttacaagagctttgtcagtcgtggttggcccttaaagagctggccgtcgat
actgagtttgatagaactaatacctattttcaccgtcttgcgctgatccagatttacgat
ggcaaggaaatttacctgattgatcctttagcatttgatgatttatcagcattaaccgag
ttgtttgcttcaacatcggtagtcaaggctctgcatagttgtagtgaggatctggaagca
ctttaccatcagtatggctttgagtttaaccaggtgttcgatacgcaaattgcagcatca
cttgatggtataggtttaagtgtaggttatggcaatattgttgagcacttcctcagtgtt
gtgttagataaagaacataccaaaaccgactggctgcaacgcccattaagtcaagagcag
agggtgtatgccgcgcaggatgttcaatacctgatgccggtctattatcgactgcgcgat
agcttgttagaaaaaggcttgtttgaatgtgtcattgaagatgtgaacagtattttcgca
gccattattcaagcggatgattatgctgaagcttatcttaaagttaaaggcgcttttcgt
ttaaatcaattccagctcaatcgtttgcaaaaactagcgcaatggcgcgaaacacttgca
cgcgataacaacattcctaagacctttgtatttcgtgaccatcatctaattgaggttagt
cagaaagaaaaaacaagtattggtgatttgctttctatgggctgtcatcgtggcagtata
cgaaagtatggggccgagatgattcatcaaattgaactggctgaccaggtggataaagag
cagtggccagagccactacagcctttccataagatccccaaaagtaaagccatgttcaat
gccttgaaagctgaggttgaaaaagtagcaaacctgaacagtattccggcagaggcttta
tgtaatcgacgtctgatcgagtactatataaagatgacgttaggctttaagggacgtcct
aatcgattctggaacagctggcgccagcgcctgcttgaagagccatttaaacaggccatg
caagaatttatctag
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