Kangiella koreensis: Kkor_2595
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Entry
Kkor_2595 CDS
T00973
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
kko
Kangiella koreensis
Pathway
kko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kkor_2595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kko03019
]
Kkor_2595
Enzymes [BR:
kko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Kkor_2595
Messenger RNA biogenesis [BR:
kko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Kkor_2595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Avidin_like
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACV28003
UniProt:
C7R9Y4
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All DBs
Position
2797422..2798684
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AA seq
420 aa
AA seq
DB search
MDTSHLSTIRFSDLGLDPKLLKAVADLGFEYCTPIQAKSLPLLLKGQNVAGQAQTGTGKT
IAFLLAIMNDILTLPEIEGRRKNEPRSLIMAPTRELAVQIAKDAVQLAKHTDLKIRVVYG
GEDHEKQRQQLIDGVDILIGTTGRLIDYFKTKAFGLEAIDSVVLDEADRMFDLGFIKDIR
YLFNRMPPATDRLNMLFSATLSHRVQELAYEHMNNPQHVQVQTQQVSANKIREALFYPSR
EEALPLLVGLMQRLEPEKSIVFTNTKRAAEHVWACLAGNDIKAGLLTGDVHQKKRLRLLD
ELKNDDVSVLVCTDVAARGLHIDGVTHVFNYHLPDDAEDYVHRIGRTARAGAEGDAISFA
GEDFAMNLTAIEQYVGHNLPKLEIKSEYLANLKPSLPIQQKRRHPTQRRGGGKPRHPRNS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcgcatctatcaactattagattttccgatctaggacttgatcccaaattg
ctcaaggcagttgctgacctgggctttgaatattgcacaccgattcaagcaaaatctcta
cctttattattaaaagggcagaatgttgccggtcaggcacaaaccggaaccggtaaaacc
atcgcctttttattggcgattatgaacgatattctgacgttgccagaaatcgaagggcgc
cgtaaaaacgagccacgctcattaattatggctccaacccgcgaattggcggtgcaaatc
gctaaggatgcggtgcagctggccaaacatactgacctcaagattcgagtagtatatggg
ggcgaggatcacgaaaaacaacggcagcaattgattgatggtgtggatattctaattggt
accactggtcgcctgatagattacttcaaaactaaagcatttggcctggaagccattgat
agcgtcgttctggacgaagccgaccgcatgtttgatctcggctttattaaggatattcgc
tacttgttcaatcgcatgccgccagcaactgaccgcctcaatatgctgttctcagcaacc
ttgtcgcaccgcgtacaagagctcgcctatgaacacatgaataatcctcagcatgtgcag
gttcaaacccaacaggtctcggctaataaaatccgagaagccctattttaccctagtcgc
gaagaagctctgccattgctagtcggcctaatgcagcgattagaacctgaaaaatcgatt
gttttcaccaataccaaacgcgcagctgaacacgtctgggcttgcttagcaggtaatgat
atcaaagctggattgttaaccggtgatgttcatcagaaaaagcgtttacgtctactagat
gagctgaaaaatgacgatgtcagtgtattagtctgtaccgatgtcgccgctcgtgggctg
catattgacggtgtaactcatgtcttcaactatcatctaccggatgatgccgaagactat
gttcaccgcattggacgtactgcacgagcgggtgctgaaggtgatgccatcagttttgcc
ggtgaagactttgccatgaacctgacagcgatagagcaatacgtaggtcacaatttgcct
aaacttgaaatcaagtctgagtatttagctaatttaaaaccctctttgcccattcaacag
aaacgtcgtcatccgacacaacgacgtggtggcggaaaaccaagacatcctcgcaattca
taa
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