KEGG   Kluyveromyces lactis: KLLA0_B05577g
Entry
KLLA0_B05577g     CDS       T01025                                 
Name
(RefSeq) uncharacterized protein
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
kla  Kluyveromyces lactis
Pathway
kla03020  RNA polymerase
kla03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KLLA0_B05577g
  09124 Replication and repair
   03420 Nucleotide excision repair
    KLLA0_B05577g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kla03021]
    KLLA0_B05577g
   03400 DNA repair and recombination proteins [BR:kla03400]
    KLLA0_B05577g
Enzymes [BR:kla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     KLLA0_B05577g
Transcription machinery [BR:kla03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     KLLA0_B05577g
DNA repair and recombination proteins [BR:kla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      KLLA0_B05577g
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 MRNIP Zn_ribbon_RPB9
Other DBs
NCBI-GeneID: 2896961
NCBI-ProteinID: XP_451784
UniProt: Q6CWA5
LinkDB
Position
B:complement(501690..505355)
AA seq 1221 aa
MTEYYDEDPYGYDEEEAAISAEDSWTVISAFFREKGLVSQQLDSFNQFINYTIQDLILED
STLILEQLAQHTTETDNISRKYEISFGKIYLAKPSMTESDGVSHAMYPQEARLRNLTYAS
GLFVEIQKRTYQAIDIPGRDLKYEIITEESEENEENNKIFIGRVPIMLRSKYCLLDDLTE
SDLYRLKECPFDMGGYFIINGSEKVLIAQERSAGNIVQVFKKSAPSPISHIAEIRSALEK
GSRFISTLQVKLYGREGSTSRTIKATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVN
DWQMLEMLKPCVEEGFVIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQ
LEGFESRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTR
DILRFMQRSVEEAKDFNLKLAVKATTITAGLKYALATGNWGEQKKSMSSRAGVSQVLNRY
TYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCIS
VGTDPLPIITFLNEWGMEPLEDYIPHQSPDATRVFVNGVWHGIHRNPAKLVDTIRKLRRK
GDITPEVSIVRDIREKELKIFTDAGRVYRPLFIVDENPETGRKELKVKKGHVRKLMLTEY
QDIEGGFDDEEEMNYTWTSLLNEGLVEYIDAEEEETILIAMQHEDLDPALLPVADSEDDL
DPARRIRAIHNSNIFTHCEIHPSMILGVAASVIPFPDHNQSPRNTYQSAMGKQAMGVFLT
NYNVRMDTMANILYYPQKPLGTTRAMEYLKFRELPAGQNAIVAIACYSGYNQEDSMIMNQ
SSIDRGLFRSLFFRSYMDQEKRIGMSITESFEKPHRTNTLRMKHGTYDKLDDDGLIAPGV
RVSGDDMIIGKTTPIPPDAEELGQRTAFHSKRDASTPLRSTENGIVDQVLITTNQEGLKF
VKVRVRTTKIPQIGDKFASRHGQKGTIGITYRTEDMPFTAEGVVPDLIINPHAIPSRMTV
AHLIECLLSKVAALSGNEGDASPFTDITVDGISRLLREHGYQSRGFEVMYNGHTGKKLMA
QIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGA
AAFLKERLMEASDAFRVHICGICGLMSVVAKLKHNQFECRSCKNKIDIYQVHIPYAAKLL
FQELMAMNIAPRLYTDRSKDF
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgactgaatactatgatgaagatccatatgggtacgatgaggaagaagctgctatttca
gcagaagattcgtggactgttatctccgctttcttcagagaaaaaggtttagtatctcag
cagttggattcttttaaccaattcatcaactatacgattcaggatcttatcttggaagac
agtaccttgattttggaacaattagcacagcataccactgaaacggacaacatttccaga
aagtatgaaatttcatttggtaagatttatttggccaaaccatccatgactgagtcagat
ggtgtttctcatgcgatgtatccgcaggaagcccgtctcagaaacttgacttacgcatca
ggtttatttgtggaaattcagaagagaacttatcaggctattgatattccaggtcgtgat
ttgaaatacgaaattatcactgaggaaagtgaagagaatgaggaaaataataaaattttc
atcgggagagtacctatcatgttgagatcgaagtactgtttgttggacgatttgacagaa
tctgatttgtatcgtttgaaggaatgtccgttcgacatgggtggttactttatcattaac
ggttcagaaaaggttttgatcgctcaagaacgttctgcaggtaatattgtccaagtgttc
aagaaatctgctccttctccaatctcacatatcgcagaaattagatctgctctagaaaag
ggctctcgttttatcagtacacttcaggtcaagttgtatggtcgtgaaggttccacctct
cgtaccatcaaggcaactttaccgtatatcaagcaagatattcccattgtgattattttc
agagcattaggtatcattccagatggtgaaatcttagaacatatctgttatgatgtcaac
gattggcaaatgttagaaatgttgaaaccatgtgtggaggaagggtttgttattcaggat
agagaaacagctttggatttcattggtcgtcgtggtacagctttgggtatcaagaaggag
aaaagaatccagtacgccaaagatattttacaaaaggaatttttacctcatattacccaa
ttggaaggttttgaaagcagaaaagctttcttcttaggttatatgattaatagactattg
ctttgtgctttagaccgtaaggatcaagatgaccgtgaccacttcggtaagaaaagattg
gatttggcaggacctttgttagctcaattgttcaagactttgttcagaaaattaacaaga
gatattctacgttttatgcaaagatctgttgaagaagctaaagacttcaatcttaaattg
gctgtcaaggccactaccattaccgccggtcttaagtatgctttggctactggtaactgg
ggtgaacaaaagaagtcgatgtcgtctagagctggtgtttctcaagttttaaaccgttat
acttattcgtcaacactatctcatcttagaagaacaaatacgccaatcggccgtgatggt
aagttagccaagcctcgtcaattgcataatacacattggggtttggtttgtcccgcagaa
acacctgaaggtcaagcatgtggtcttgttaagaacttgtccttgatgtcttgtatttct
gttggtactgatcccctgccaattatcaccttcttgaatgaatggggtatggaaccgtta
gaagattacatacctcatcaatctccagatgctacaagagtttttgttaacggtgtctgg
catggtattcacagaaatcctgctaaattggttgataccatcagaaagcttagaagaaaa
ggtgatattacccctgaagtttctatcgttagggatattcgtgaaaaggaactaaagatc
ttcacagatgctggtagagtttatagaccattatttattgtggatgaaaacccagagact
ggtcgtaaggaactaaaggttaaaaagggacatgtcagaaagttaatgttaactgaatac
caagatattgaaggtggattcgacgacgaagaagaaatgaactatacttggacatcgttg
ctcaatgagggcctcgtcgagtacatcgatgctgaagaagaagaaactattctaattgct
atgcaacatgaagatttggatccagctttactacctgtggcagactctgaagatgatctg
gatccagccagacgtatcagagctatacataattcaaacattttcacacattgtgaaatt
cacccttcaatgattcttggtgtagctgcttctgttattcctttccctgaccataaccaa
tctcctcgtaatacttaccaatcagcgatgggtaaacaagctatgggtgttttcctaacg
aattataatgtccgtatggatacaatggctaacattctatactaccctcagaaacccctg
ggtaccacaagagcaatggaatatttgaaattcagagaattaccagccggtcaaaatgcc
attgttgctatcgcatgctattcaggttataatcaggaagattccatgatcatgaatcaa
tcatcaatcgatagaggtttattcagatccttgttcttcagatcatacatggatcaagaa
aagagaattggtatgtcgatcacagaatcgtttgaaaaaccacacagaacaaatacacta
agaatgaagcacggtacttacgacaaattggacgacgatggtttgattgctcccggtgtc
agagtgtcaggtgacgatatgattattggtaaaacaacaccaattccacctgatgctgaa
gaattgggtcaaagaaccgcattccactccaagcgtgatgcctctacgcctctaagatct
actgaaaatggtattgtcgaccaagttttgattactaccaaccaggagggtttgaaattt
gttaaggttagagttagaacgaccaaaattcctcaaatcggtgataaatttgcatcccgt
cacggtcaaaagggtactattggtattacataccgcacagaagatatgccattcacagct
gaaggtgttgtaccggacttaataatcaatcctcatgccattccatctcgtatgaccgtc
gctcatttgattgaatgtttgttaagtaaggttgccgctctatctggtaatgaaggtgat
gcttccccatttacagatattacagtggatggtatatccaggttgctacgtgagcatggt
tatcaatctcgtgggttcgaagtaatgtataatggtcataccggtaaaaagttgatggca
caaattttcttcggccctacatactaccaaagattaaggcatatggtggatgataaaatt
cacgcgagagcaagaggtccgatgcaagtactaacaagacaacccgtggaaggtagatcc
agagacggtggtttaagattcggtgagatggaacgtgattgtatgattgctcacggtgcc
gccgccttcttgaaggaaagattaatggaagcttcggatgcattcagagtacacatttgc
ggtatctgtgggttaatgtcagttgttgcaaagttgaagcacaatcaatttgaatgtcgt
tcatgtaaaaacaaaattgacatttatcaagtgcacattccttatgcagctaagttacta
ttccaagaattaatggccatgaatattgcaccacgtctttacactgaccgttcaaaggat
ttttaa

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