Kluyveromyces lactis: KLLA0_C16599g
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Entry
KLLA0_C16599g CDS
T01025
Name
(RefSeq) uncharacterized protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
kla
Kluyveromyces lactis
Pathway
kla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLLA0_C16599g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kla03019
]
KLLA0_C16599g
03036 Chromosome and associated proteins [BR:
kla03036
]
KLLA0_C16599g
Enzymes [BR:
kla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KLLA0_C16599g
Messenger RNA biogenesis [BR:
kla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
KLLA0_C16599g
mRNA degradation factors
5'-3' decay
Decapping complex
KLLA0_C16599g
Chromosome and associated proteins [BR:
kla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
KLLA0_C16599g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Phage_integrase
AAA_19
Motif
Other DBs
NCBI-GeneID:
2892299
NCBI-ProteinID:
XP_452942
UniProt:
Q6CSZ7
LinkDB
All DBs
Position
C:1453655..1455199
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AA seq
514 aa
AA seq
DB search
MGSDTSESNNDWKTQLNIPKKDTRPQTDDVLNTKGRSFEDFYLKRELLMGIFEAGFEKPS
PIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQT
SQVVRTLGKHCGISCMVTTGGTNLRDDIMRLNEPVHILVGTPGRVLDLASRRVTDLSECH
LFIMDEADKMLSRDFKVLAEQILGFLPERRQLLLFSATFPVTVKEFMVKHLKNPHEINLM
DELTLKGISQFYAFVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITELGFSC
YYSHARMKQSERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHR
IGRSGRFGHLGLAINLINWNDRFNLYKIEQELNTEIAPIPSQIDKSLYVAEDSSAVPIPF
PLESLPITANAPQQPANAEPLPPQQTQVQFHAPPQQQQQQQQQQQQQQYQQFPNQQQQQY
GQPLMPQNYQQQAYPPQPFPSKGFPQQQYTQAPQ
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgatacaagcgaaagtaataacgactggaagacccagttgaatattcctaaa
aaggatacgaggcctcagactgatgatgtgttgaacacgaagggtcgttcgtttgaagat
ttctatttgaaaagagaacttttgatgggtatatttgaagcagggtttgagaagccttcc
ccaatccaagaagaagctattcccgttgccattgccgggaaggatatattagcgcgtgcc
aagaacggtactggtaagacggcagcgttcgttataccaactttggaaaaagtgaagccc
aagttgaacaaaattcaagcattgattatggttcctacaagagagttggctttgcaaaca
tcacaagtggtgcgcacgctagggaaacactgtggtatctcttgtatggttaccactggt
ggtacgaatttgagagatgacatcatgagattaaatgaacctgtacacattttggtgggt
acgcccggtagagtgctagatttggcatcaagaagagtgacagatttgagcgaatgtcat
ttgttcattatggatgaagcggataagatgttaagtcgtgactttaaagtgttggcggaa
caaatacttgggttcttaccagaacgtcgtcaactgcttttgttcagtgcgactttccca
gtcaccgtgaaagagttcatggtgaagcatttgaaaaaccctcatgagattaatttgatg
gatgaattgacactaaagggtatatcacaattttatgcattcgtggaagaaaaacaaaaa
cttcattgcttgaacactttgttcagtaaattgcaaatcaaccaagcaattatcttttgt
aattctactaaccgtgtcgaacttttggctaaaaaaattactgaattaggattttcttgt
tactactcacatgctagaatgaaacaatccgaaagaaacaaagtcttccatgaattccgc
caaggtaaagttcgtacgttggtttgttccgatttgttaactcgtggtatcgatattcaa
gccgttaatgtggtcattaacttcgatttcccaaagactgccgaaacttatttgcatcgt
attggtagatctggtaggttcggtcacttgggtttggctatcaacttgattaactggaac
gatagattcaacttgtacaagatcgagcaagaattaaacaccgaaattgctcctatccca
tctcaaattgataaatccttgtacgttgcggaagatagttccgcagtcccaatcccattc
cctttggaatccctgccaatcactgcaaatgctccccaacaacctgcaaatgctgaaccg
ttgcctcctcaacaaactcaagtgcaattccatgctcctcctcagcagcaacagcaacaa
caacagcaacaacaacaacaacaatatcaacaattcccaaaccaacaacaacagcaatat
ggtcagcctctaatgccgcaaaactaccaacaacaggcttatccacctcaacctttccca
tcaaaaggcttcccacaacaacaatacactcaagctcctcaataa
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