Kluyveromyces lactis: KLLA0_E21935g
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Entry
KLLA0_E21935g CDS
T01025
Name
(RefSeq) uncharacterized protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
kla
Kluyveromyces lactis
Pathway
kla03013
Nucleocytoplasmic transport
kla03015
mRNA surveillance pathway
kla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLLA0_E21935g
09122 Translation
03013 Nucleocytoplasmic transport
KLLA0_E21935g
03015 mRNA surveillance pathway
KLLA0_E21935g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kla03019
]
KLLA0_E21935g
03041 Spliceosome [BR:
kla03041
]
KLLA0_E21935g
Enzymes [BR:
kla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KLLA0_E21935g
Messenger RNA biogenesis [BR:
kla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
KLLA0_E21935g
Spliceosome [BR:
kla03041
]
Complex C
Other components
EJC/TREX
KLLA0_E21935g
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
KLLA0_E21935g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ANAPC_CDC26
Motif
Other DBs
NCBI-GeneID:
2894435
NCBI-ProteinID:
XP_454944
UniProt:
Q6CM95
LinkDB
All DBs
Position
E:1959770..1961083
Genome browser
AA seq
437 aa
AA seq
DB search
MSHEAEEDLLEYSDNEQEVQVDNKATEVNAEGNGESQAKDSDKKGSYVGIHSTGFKDFLL
KPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVQG
EVSVVVLCNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTEYKNDIDLLSKKETVPHIIV
ATPGRLKALVRDKHIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSAT
LSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLNEKEKNRKLAQLLDDLEFNQV
IIFVKSTVRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKEFEKRICVSTDVFGRG
IDIERINLAINYDMPNEADQYLHRVGRAGRFGTKGLAISMISSEDDEQVLAKIQERFDVK
ITEFPEEGVDPSTYLNT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgaagcagaagaggatttattggagtattccgataacgaacaagaagttcaa
gttgacaacaaggccactgaagtgaatgccgagggtaacggtgagagccaagcaaaggat
tctgataagaaaggttcttatgttggtattcactccactggtttcaaggatttcttgttg
aagccagaattgtccagagctatcattgactgtggttttgaacatccttctgaagtgcaa
caacataccattcctcaatccattcatggtactgacgtcttatgtcaagctaagtctggt
ctaggtaagactgctgtgttcgtgttgtctactttgcaacaattggatccagttcaaggt
gaagtcagtgtcgtcgtgctatgtaacgcgagagaattggcttaccaaattagaaacgaa
tacttgagattctccaaatacatgccagacgttaagactgctgtattttacggtggtact
gaatataagaacgatattgatttgctatccaagaaggaaaccgtccctcatatcattgta
gccactcctggtcgtttaaaggctttggttagagacaagcatatcgatctatctcacgtc
aagaactttgtcattgatgaatgtgacaaggtcttggaagaattggatatgagaagagat
gttcaagatatttttagagccaccccaagagataagcaagttatgatgttttccgcaact
ctatcccaagaaatcagaccaatctgtagaagattccttcaaaatccattagaaatcttt
gtcgatgacgaagccaagttgactctacacggtttgcaacaatactatatcaaattgaat
gaaaaggaaaagaaccgtaagttggctcaattgttggacgatttggaattcaaccaagtt
atcattttcgtcaagtctactgtcagagctaacgaattgaccaaactattgaatgcttct
aacttcccagccatcactgtgcatggtcacatgaaacaagaagaacgtattgctcgttac
aaggctttcaaggaattcgaaaaacgtatttgtgtttccactgatgttttcggtagaggt
attgatatcgaacgtattaacttggccattaattatgatatgccaaacgaagcagaccaa
tacttgcatcgtgttggtagagctggtagattcggtaccaagggtttggctatctccatg
atatctagtgaagatgacgaacaagtcttggccaagatccaagaaagatttgatgttaag
atcactgagttcccagaagaaggtgttgatccatctacttatttgaacacttag
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