KEGG   Kluyveromyces lactis: KLLA0_F05071g
Entry
KLLA0_F05071g     CDS       T01025                                 
Name
(RefSeq) uncharacterized protein
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
kla  Kluyveromyces lactis
Pathway
kla03020  RNA polymerase
kla03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KLLA0_F05071g
  09124 Replication and repair
   03420 Nucleotide excision repair
    KLLA0_F05071g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kla03021]
    KLLA0_F05071g
   03400 DNA repair and recombination proteins [BR:kla03400]
    KLLA0_F05071g
Enzymes [BR:kla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     KLLA0_F05071g
Transcription machinery [BR:kla03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     KLLA0_F05071g
DNA repair and recombination proteins [BR:kla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      KLLA0_F05071g
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R
Other DBs
NCBI-GeneID: 2895750
NCBI-ProteinID: XP_455310
UniProt: Q6CL79
LinkDB
Position
F:complement(496371..501533)
AA seq 1720 aa
MVDFPYSSAPLRTIKEVQFGLFSPEEVRGISVAKIEFPETMDESQMKAKIGGLNDPRLGS
IDRNYKCQTCGEGMAECPGHFGHIELAKPVFHIGFLSKIKKVCESVCMHCGKLLLDEYNE
QMRQAIKIKDPKRRFNAVWTLCKAKMVCETEVPSPDDPTVFLSRGGCGHIQPSIRKDGLS
LVGTWKKDKNADDSDQPEKRIISAEEILNVFKHISPEDGWRLGFNEDFSRPEWMILTVLP
VPPPPVRPSISFNESQRGEDDLTYKLGDILKANINVQKLEINGSPQHVIQESESLLQFHV
ATYMDNDIAGQPQAVQKSGRPIKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLD
LDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIRESGDRIDLRYSKR
AGDIQLQYGWKVERHITDNDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLNLSVTSPYNA
DFDGDEMNLHVPQSEETRAELSQLCAVPLQIVSPQSNKPCMGIVQDTLCGIRKMTLRDTF
IELDQVLNMLYWIPDWDGIIPTPAILKPVPLWSGKQVLSMAIPNGIHLQRFDDGTTFLSP
KDNGMLIIDGKIIFGVVDKKTVGSSSGGLIHVVTREKGPEICARLFSNIQKVVNYWLLHN
GFSIGIGDTIADEKTMREITEAIAVAKKKVEDVTKEAQANLLTAKHGMTLRESFEDNVVR
YLNEARDKAGRSAEVNLKDLNNVKQMVSAGSKGSFINIAQMSACVGQQSVEGKRIAFGFA
DRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRR
LVKALEDIMVHYDGTTRNSLGNVIQFIYGEDGMDAAHIEKQSIDTIPGSDSAFERRYRID
LLNEEYALDPSLLESGSEIIGDSKLQLLLNDEYKQLVDDRQILRRVFVDGEHNWPLPVNI
KRIIQNSQQTFRIDQTKPTDLTIEDVISGVRKLQEKLLVVRGKSDILKEAQQNAITLFCC
LLRSRLATRRVIEEYRLNRQTFDWVLNNIEAQFLRSIVHPGEMVGVLAAQSIGEPATQMT
LNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYLDPEYAADQEKAKEIRSAIEH
TTLKSVTVASEIYYDPDPRSTVIEDDEEIIQLHFSLMDEETEKSLDYQSPWLLRLELDRA
AMTDKDLTMGQVGEKIKETFKNDLFVIWSEDNAEKLIIRCRVIRDPKTLDADVEAEEDHM
LKKIENSMLEKITLRGVEDITRVVMMKYDRKVPSETGEYHKVPEWVLETDGVNLSEVMTV
SGVDGSRIYTNSFIDIMNVLGIEAGRAALYREVYNVIASDGSYVNYRHMALLVDVMTSQG
FLMSVTRHGFNRADTGALMRCSFEETVEILFEAGAAAELDDCRGVSENVILGQMAPIGTG
AFDVMIDDESLVKYMPEHKEVKTEGQEGGATPYSNESGLANAEINVKDELMFSPLVESGG
ADALAGGFTAYGGADYGSATSPFSGYGNGPTSPGFGEVSSPGFSPTSPGYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPQYSPGSYSPAEPKQQESDEEKKENK
NT seq 5163 nt   +upstreamnt  +downstreamnt
atggtcgattttccttattctagtgctcctcttcgtaccataaaagaagtccagtttggt
cttttctcacctgaagaagttcgtggcatttcagtggctaaaatcgagttcccagaaaca
atggatgagagtcaaatgaaagctaagattggtggacttaatgacccaagactaggatct
atagatcgtaactacaaatgtcaaacttgtggtgaaggtatggccgaatgtccaggtcac
tttggacatatcgaacttgccaagcctgtgtttcacattggtttcctctcgaaaatcaag
aaggtctgcgagtctgtctgtatgcattgtggtaaattactccttgatgaatataatgaa
cagatgagacaagctattaagataaaggatccaaagagaaggttcaacgccgtgtggact
ctgtgcaaagctaagatggtttgtgaaacagaagttccatctcctgatgatccaacagtg
ttcctctcgagaggaggctgtggtcacattcaaccaagcattcgtaaggatggtttgagt
ttagtaggtacatggaagaaagataaaaatgctgacgactcagatcaaccagaaaagcga
ataatatctgctgaagaaattcttaacgtgttcaagcacatctcaccagaagatggttgg
agattgggattcaatgaagatttctctcgccctgaatggatgattttgaccgtcttgcca
gttccacctccacctgttcgtccatcgatttctttcaacgaatcacaaagaggtgaggat
gatttaacatacaaattaggagatatcttgaaggcaaatattaacgttcagaaacttgaa
atcaatggttcccctcaacacgttatccaagaatcggagtctttgttgcagttccatgta
gcaacttacatggacaatgatattgctggtcaaccacaagctgtccaaaaatccggtcgt
cctattaaatccattcgtgcccgtttaaaaggtaaagaaggtcgtattagaggtaattta
atgggtaaacgtgttgatttctctgcccgtacagtgatttcaggtgatcctaacttagac
ttggaccaagttggtgtcccaaaatctattgccaaaactttaacatacccagaagtcgtc
acaccttacaatattgaccggttgactcaactagttcgtaatggtccaaatgagcatccg
ggtgctaaatacgttattcgtgaaagtggtgatcgtatcgatttacgttacagtaaaaga
gctggtgacatccaacttcagtatggttggaaagtcgaacgtcatattacagacaatgat
ccagttcttttcaatcgtcaaccatcccttcacaaaatgtctatgatggctcacagagtg
aaagtcatgccatattctacctttagattgaacttatctgtcacttccccatataatgca
gatttcgatggtgacgaaatgaatttacatgttccccaatctgaagagactagagccgaa
ttgtcgcagttatgtgcagtgcctttgcaaattgtgtccccacaatctaacaaaccttgt
atgggtattgtgcaggatacattatgtggtattcgtaaaatgactctaagagacactttc
atagaattggatcaagtgttgaatatgctttactggattcctgactgggacggaattatc
cccactcctgcaatcttgaagccagtaccactatggtcgggtaagcaagtgctatccatg
gctattcctaatggtattcacttacaacgttttgatgatggaacaactttcttatcacca
aaagacaatggtatgttgatcattgatggtaaaatcatttttggtgttgttgacaagaag
accgtcggttcatctagtggtggtttaatccacgtggttacgagagaaaagggacctgaa
atttgcgcaagactcttcagtaacatccaaaaggttgtcaattactggctcttgcataat
ggtttctccattggtattggtgataccattgctgatgagaaaaccatgagggagattact
gaagctatcgctgttgccaagaagaaggtcgaagatgtcacgaaagaggctcaagcgaac
ttattaacggcaaaacacggtatgacattgcgtgaatcgttcgaagataatgtcgttcgt
tatctaaacgaagctagagataaagctggtcgttcagcagaagtcaacttgaaagattta
aataacgtcaagcagatggttagtgcggggtcgaagggttcctttattaatatcgctcaa
atgtctgcatgtgttggtcaacaatctgttgaaggtaaacgtattgctttcggtttcgct
gatcgtactcttccacatttctccaaagacgattattctcctgaatccaagggtttcgtg
gaaaattcatatttgagaggtctaacaccccaagagtttttcttccacgcaatgggtggt
cgtgaaggtttaatcgataccgccgtgaaaacagctgaaacaggttatattcaacgtcgt
ttggtcaaagctttggaggatatcatggtccattatgatggtacaacaagaaactctcta
gggaatgttatacagttcatctatggtgaagatggtatggatgcagcgcacatcgaaaag
cagtcaattgatactattcctggatctgatagtgctttcgaaaggcgttacagaatcgac
ctattaaatgaggagtacgccttggatccctctcttttggaatcaggatccgaaattatc
ggagactcaaaattgcaattactacttaacgatgagtacaaacagcttgttgatgaccgt
caaattttgagaagggtgtttgtcgatggtgaacacaattggcctctacctgttaacatc
aagcgtattatccagaactcacagcaaacattccgtatcgatcaaaccaaaccaactgat
ttaacaattgaagatgttatttcaggcgtaaggaaattacaggagaagcttctagtcgta
cgtgggaagagtgacatcttaaaagaagctcaacaaaatgcaatcacgttattctgctgc
ttattgcgttctcgtctagctacacgtagggtgattgaagaatacagattgaacagacag
acctttgattgggtgctaaacaatatcgaagcacaattcctaagatctattgttcatcca
ggtgaaatggttggtgttttggctgctcaatccatcggtgagcctgccactcagatgaca
ttgaatactttccatttcgctggtgtggcctccaagaaggttacttcaggtgttcctcgt
ttaaaggaaattttaaatgtcgccaaaaatatgaagaccccgtctcttactgtgtattta
gatccagagtacgctgctgaccaagagaaggctaaagaaatccgttcagctattgaacac
acaactttaaagagtgtcaccgtcgcatctgaaatttattatgacccagaccctcggtcg
actgtcattgaagatgatgaggaaattattcagttacacttctccttgatggatgaggaa
acagaaaaatctctagattatcaatctccatggttattacgtctagaacttgatcgtgcg
gcaatgactgataaagacttaactatgggtcaagtcggtgaaaaaatcaaggagacattc
aagaacgacttgttcgttatatggtcagaagataatgctgagaaattgattattcgttgt
cgtgttatccgtgatcctaagaccttggacgcagacgtcgaagcggaggaagatcacatg
ttgaagaaaatcgaaaattctatgttagagaaaatcactctgcgtggtgtcgaagatatt
acacgtgtggtgatgatgaagtatgatagaaaagtccctagtgaaaccggtgaataccat
aaagttcccgaatgggttctagaaacagatggtgtgaatctttctgaagtcatgacagtg
tccggtgtagatggctcacgtatctacacaaactccttcattgacataatgaatgtatta
ggtattgaggctggtcgtgcggccttatacagagaagtgtacaatgttattgcttccgat
ggttcttatgttaattaccgtcatatggctctattagtcgatgtcatgacatcacaaggt
ttcttaatgtctgttacccgtcacgggttcaacagagccgacactggtgctttaatgaga
tgctcctttgaagaaactgtggaaattctattcgaggcaggtgcggcagcagagttagac
gattgccgtggtgtctctgagaatgtcatcttaggtcaaatggcgccaattggtaccggt
gcatttgacgtcatgattgatgacgaatctctagtgaaatacatgcctgaacataaagaa
gtcaagacagaaggccaagaaggaggtgctacaccatattccaacgaaagtggtcttgca
aacgcagagattaatgttaaggacgaactaatgttctcacctttggttgaatcaggggga
gcagacgctctcgctggtggatttactgcttatggtggggccgactatggttctgcaacc
tctccgttcagtggatatggtaacggccctacttcccctggctttggagaagtttcctct
ccaggattctctccaacctcaccaggttattcaccaacttcaccatcatattcaccaact
tcgccatcatattcacctacatctccgtcttactcacctacatctccttcttactcacca
acgtcaccatcatattctcctacatccccttcgtattcaccaacatcgccatcctactca
ccaacatcgccatcatactccccaacatctccatcgtactccccaacatcaccttcatat
tctccaacttcgccttcctattctcctacatcaccatcttattctcctacatcaccatct
tattcacccacttcaccctcctactctccaacctctccttcatattctcctacatcgcca
tcatattctcccacttcaccttcctattctccaacatcgccatcctattcccccacctca
ccatcctattcccctacttctccatcttactcaccaacctcaccacaatacagtcctggt
tcttattctccagctgaacctaagcaacaagaatcagacgaagagaagaaagaaaataag
tga

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