Kluyveromyces lactis: KLLA0_F05071g
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Entry
KLLA0_F05071g CDS
T01025
Name
(RefSeq) uncharacterized protein
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
kla
Kluyveromyces lactis
Pathway
kla03020
RNA polymerase
kla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KLLA0_F05071g
09124 Replication and repair
03420 Nucleotide excision repair
KLLA0_F05071g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kla03021
]
KLLA0_F05071g
03400 DNA repair and recombination proteins [BR:
kla03400
]
KLLA0_F05071g
Enzymes [BR:
kla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KLLA0_F05071g
Transcription machinery [BR:
kla03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
KLLA0_F05071g
DNA repair and recombination proteins [BR:
kla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
KLLA0_F05071g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
2895750
NCBI-ProteinID:
XP_455310
UniProt:
Q6CL79
LinkDB
All DBs
Position
F:complement(496371..501533)
Genome browser
AA seq
1720 aa
AA seq
DB search
MVDFPYSSAPLRTIKEVQFGLFSPEEVRGISVAKIEFPETMDESQMKAKIGGLNDPRLGS
IDRNYKCQTCGEGMAECPGHFGHIELAKPVFHIGFLSKIKKVCESVCMHCGKLLLDEYNE
QMRQAIKIKDPKRRFNAVWTLCKAKMVCETEVPSPDDPTVFLSRGGCGHIQPSIRKDGLS
LVGTWKKDKNADDSDQPEKRIISAEEILNVFKHISPEDGWRLGFNEDFSRPEWMILTVLP
VPPPPVRPSISFNESQRGEDDLTYKLGDILKANINVQKLEINGSPQHVIQESESLLQFHV
ATYMDNDIAGQPQAVQKSGRPIKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLD
LDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIRESGDRIDLRYSKR
AGDIQLQYGWKVERHITDNDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLNLSVTSPYNA
DFDGDEMNLHVPQSEETRAELSQLCAVPLQIVSPQSNKPCMGIVQDTLCGIRKMTLRDTF
IELDQVLNMLYWIPDWDGIIPTPAILKPVPLWSGKQVLSMAIPNGIHLQRFDDGTTFLSP
KDNGMLIIDGKIIFGVVDKKTVGSSSGGLIHVVTREKGPEICARLFSNIQKVVNYWLLHN
GFSIGIGDTIADEKTMREITEAIAVAKKKVEDVTKEAQANLLTAKHGMTLRESFEDNVVR
YLNEARDKAGRSAEVNLKDLNNVKQMVSAGSKGSFINIAQMSACVGQQSVEGKRIAFGFA
DRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRR
LVKALEDIMVHYDGTTRNSLGNVIQFIYGEDGMDAAHIEKQSIDTIPGSDSAFERRYRID
LLNEEYALDPSLLESGSEIIGDSKLQLLLNDEYKQLVDDRQILRRVFVDGEHNWPLPVNI
KRIIQNSQQTFRIDQTKPTDLTIEDVISGVRKLQEKLLVVRGKSDILKEAQQNAITLFCC
LLRSRLATRRVIEEYRLNRQTFDWVLNNIEAQFLRSIVHPGEMVGVLAAQSIGEPATQMT
LNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYLDPEYAADQEKAKEIRSAIEH
TTLKSVTVASEIYYDPDPRSTVIEDDEEIIQLHFSLMDEETEKSLDYQSPWLLRLELDRA
AMTDKDLTMGQVGEKIKETFKNDLFVIWSEDNAEKLIIRCRVIRDPKTLDADVEAEEDHM
LKKIENSMLEKITLRGVEDITRVVMMKYDRKVPSETGEYHKVPEWVLETDGVNLSEVMTV
SGVDGSRIYTNSFIDIMNVLGIEAGRAALYREVYNVIASDGSYVNYRHMALLVDVMTSQG
FLMSVTRHGFNRADTGALMRCSFEETVEILFEAGAAAELDDCRGVSENVILGQMAPIGTG
AFDVMIDDESLVKYMPEHKEVKTEGQEGGATPYSNESGLANAEINVKDELMFSPLVESGG
ADALAGGFTAYGGADYGSATSPFSGYGNGPTSPGFGEVSSPGFSPTSPGYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPQYSPGSYSPAEPKQQESDEEKKENK
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atggtcgattttccttattctagtgctcctcttcgtaccataaaagaagtccagtttggt
cttttctcacctgaagaagttcgtggcatttcagtggctaaaatcgagttcccagaaaca
atggatgagagtcaaatgaaagctaagattggtggacttaatgacccaagactaggatct
atagatcgtaactacaaatgtcaaacttgtggtgaaggtatggccgaatgtccaggtcac
tttggacatatcgaacttgccaagcctgtgtttcacattggtttcctctcgaaaatcaag
aaggtctgcgagtctgtctgtatgcattgtggtaaattactccttgatgaatataatgaa
cagatgagacaagctattaagataaaggatccaaagagaaggttcaacgccgtgtggact
ctgtgcaaagctaagatggtttgtgaaacagaagttccatctcctgatgatccaacagtg
ttcctctcgagaggaggctgtggtcacattcaaccaagcattcgtaaggatggtttgagt
ttagtaggtacatggaagaaagataaaaatgctgacgactcagatcaaccagaaaagcga
ataatatctgctgaagaaattcttaacgtgttcaagcacatctcaccagaagatggttgg
agattgggattcaatgaagatttctctcgccctgaatggatgattttgaccgtcttgcca
gttccacctccacctgttcgtccatcgatttctttcaacgaatcacaaagaggtgaggat
gatttaacatacaaattaggagatatcttgaaggcaaatattaacgttcagaaacttgaa
atcaatggttcccctcaacacgttatccaagaatcggagtctttgttgcagttccatgta
gcaacttacatggacaatgatattgctggtcaaccacaagctgtccaaaaatccggtcgt
cctattaaatccattcgtgcccgtttaaaaggtaaagaaggtcgtattagaggtaattta
atgggtaaacgtgttgatttctctgcccgtacagtgatttcaggtgatcctaacttagac
ttggaccaagttggtgtcccaaaatctattgccaaaactttaacatacccagaagtcgtc
acaccttacaatattgaccggttgactcaactagttcgtaatggtccaaatgagcatccg
ggtgctaaatacgttattcgtgaaagtggtgatcgtatcgatttacgttacagtaaaaga
gctggtgacatccaacttcagtatggttggaaagtcgaacgtcatattacagacaatgat
ccagttcttttcaatcgtcaaccatcccttcacaaaatgtctatgatggctcacagagtg
aaagtcatgccatattctacctttagattgaacttatctgtcacttccccatataatgca
gatttcgatggtgacgaaatgaatttacatgttccccaatctgaagagactagagccgaa
ttgtcgcagttatgtgcagtgcctttgcaaattgtgtccccacaatctaacaaaccttgt
atgggtattgtgcaggatacattatgtggtattcgtaaaatgactctaagagacactttc
atagaattggatcaagtgttgaatatgctttactggattcctgactgggacggaattatc
cccactcctgcaatcttgaagccagtaccactatggtcgggtaagcaagtgctatccatg
gctattcctaatggtattcacttacaacgttttgatgatggaacaactttcttatcacca
aaagacaatggtatgttgatcattgatggtaaaatcatttttggtgttgttgacaagaag
accgtcggttcatctagtggtggtttaatccacgtggttacgagagaaaagggacctgaa
atttgcgcaagactcttcagtaacatccaaaaggttgtcaattactggctcttgcataat
ggtttctccattggtattggtgataccattgctgatgagaaaaccatgagggagattact
gaagctatcgctgttgccaagaagaaggtcgaagatgtcacgaaagaggctcaagcgaac
ttattaacggcaaaacacggtatgacattgcgtgaatcgttcgaagataatgtcgttcgt
tatctaaacgaagctagagataaagctggtcgttcagcagaagtcaacttgaaagattta
aataacgtcaagcagatggttagtgcggggtcgaagggttcctttattaatatcgctcaa
atgtctgcatgtgttggtcaacaatctgttgaaggtaaacgtattgctttcggtttcgct
gatcgtactcttccacatttctccaaagacgattattctcctgaatccaagggtttcgtg
gaaaattcatatttgagaggtctaacaccccaagagtttttcttccacgcaatgggtggt
cgtgaaggtttaatcgataccgccgtgaaaacagctgaaacaggttatattcaacgtcgt
ttggtcaaagctttggaggatatcatggtccattatgatggtacaacaagaaactctcta
gggaatgttatacagttcatctatggtgaagatggtatggatgcagcgcacatcgaaaag
cagtcaattgatactattcctggatctgatagtgctttcgaaaggcgttacagaatcgac
ctattaaatgaggagtacgccttggatccctctcttttggaatcaggatccgaaattatc
ggagactcaaaattgcaattactacttaacgatgagtacaaacagcttgttgatgaccgt
caaattttgagaagggtgtttgtcgatggtgaacacaattggcctctacctgttaacatc
aagcgtattatccagaactcacagcaaacattccgtatcgatcaaaccaaaccaactgat
ttaacaattgaagatgttatttcaggcgtaaggaaattacaggagaagcttctagtcgta
cgtgggaagagtgacatcttaaaagaagctcaacaaaatgcaatcacgttattctgctgc
ttattgcgttctcgtctagctacacgtagggtgattgaagaatacagattgaacagacag
acctttgattgggtgctaaacaatatcgaagcacaattcctaagatctattgttcatcca
ggtgaaatggttggtgttttggctgctcaatccatcggtgagcctgccactcagatgaca
ttgaatactttccatttcgctggtgtggcctccaagaaggttacttcaggtgttcctcgt
ttaaaggaaattttaaatgtcgccaaaaatatgaagaccccgtctcttactgtgtattta
gatccagagtacgctgctgaccaagagaaggctaaagaaatccgttcagctattgaacac
acaactttaaagagtgtcaccgtcgcatctgaaatttattatgacccagaccctcggtcg
actgtcattgaagatgatgaggaaattattcagttacacttctccttgatggatgaggaa
acagaaaaatctctagattatcaatctccatggttattacgtctagaacttgatcgtgcg
gcaatgactgataaagacttaactatgggtcaagtcggtgaaaaaatcaaggagacattc
aagaacgacttgttcgttatatggtcagaagataatgctgagaaattgattattcgttgt
cgtgttatccgtgatcctaagaccttggacgcagacgtcgaagcggaggaagatcacatg
ttgaagaaaatcgaaaattctatgttagagaaaatcactctgcgtggtgtcgaagatatt
acacgtgtggtgatgatgaagtatgatagaaaagtccctagtgaaaccggtgaataccat
aaagttcccgaatgggttctagaaacagatggtgtgaatctttctgaagtcatgacagtg
tccggtgtagatggctcacgtatctacacaaactccttcattgacataatgaatgtatta
ggtattgaggctggtcgtgcggccttatacagagaagtgtacaatgttattgcttccgat
ggttcttatgttaattaccgtcatatggctctattagtcgatgtcatgacatcacaaggt
ttcttaatgtctgttacccgtcacgggttcaacagagccgacactggtgctttaatgaga
tgctcctttgaagaaactgtggaaattctattcgaggcaggtgcggcagcagagttagac
gattgccgtggtgtctctgagaatgtcatcttaggtcaaatggcgccaattggtaccggt
gcatttgacgtcatgattgatgacgaatctctagtgaaatacatgcctgaacataaagaa
gtcaagacagaaggccaagaaggaggtgctacaccatattccaacgaaagtggtcttgca
aacgcagagattaatgttaaggacgaactaatgttctcacctttggttgaatcaggggga
gcagacgctctcgctggtggatttactgcttatggtggggccgactatggttctgcaacc
tctccgttcagtggatatggtaacggccctacttcccctggctttggagaagtttcctct
ccaggattctctccaacctcaccaggttattcaccaacttcaccatcatattcaccaact
tcgccatcatattcacctacatctccgtcttactcacctacatctccttcttactcacca
acgtcaccatcatattctcctacatccccttcgtattcaccaacatcgccatcctactca
ccaacatcgccatcatactccccaacatctccatcgtactccccaacatcaccttcatat
tctccaacttcgccttcctattctcctacatcaccatcttattctcctacatcaccatct
tattcacccacttcaccctcctactctccaacctctccttcatattctcctacatcgcca
tcatattctcccacttcaccttcctattctccaacatcgccatcctattcccccacctca
ccatcctattcccctacttctccatcttactcaccaacctcaccacaatacagtcctggt
tcttattctccagctgaacctaagcaacaagaatcagacgaagagaagaaagaaaataag
tga
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integrated database retrieval system