Klebsiella sp. CTHL.F3a: K7H21_02470
Help
Entry
K7H21_02470 CDS
T08882
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
klc
Klebsiella sp. CTHL.F3a
Brite
KEGG Orthology (KO) [BR:
klc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klc03019
]
K7H21_02470 (csrD)
Messenger RNA biogenesis [BR:
klc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K7H21_02470 (csrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
QZY80545
LinkDB
All DBs
Position
520140..522080
Genome browser
AA seq
646 aa
AA seq
DB search
MRLTTKFSAFVTLLTGLTIFVTLIGASLSFYNGIQLKMTNRVQAVATMLDNRLVSMSFDQ
IEPQMDELMTPVEAVRVDFQLNGKPVYSHSRTDNYRPLGSSNQFRDITVPSLKHPGMAIH
LVYLDPMADYFRSLHVTAPLSIAIGFMVLIIFFSVRWIRRQLAGQELLELRTARILNGER
GPQVRGSVHEWPANTSSALDMLLSELQFASDQRSRMDTLIRSYVAQDSKTGLSNRLFFDN
QLSTLLEDQEKVGSYGIVMMIRLPDFDLLRDNWGRAATEEHYFTLINMLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICAFRSGQTA
AQVMEHAEAATRNAVLQGSNSWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TRDGRVHHRELMCRLYDGKEEVIAAEYMPMVLQFGLAEEYDRLQITRLLPFLGFWPEENL
ALQVTVESLIRPRFQRWLRDTLMQCEKSHRRRIIFELAEADVCQYIGRLQPVMRLVNALG
IRIAVVQAGLTLVGTSWIKQLDVEVIKLHSGLSRNIEKRSENQLLVQSLVEACKGMPVQV
FATGVLSRSEWQVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattctcagcttttgtcacgttgctcaccggtctgacgatcttt
gtcacgctgattggcgcgtcgctgagtttttataacggcattcagctaaaaatgactaac
cgcgttcaggcggtggcgacgatgctggataaccgtctggtctctatgtcctttgaccag
attgaaccgcagatggatgagctgatgacgccggtcgaagcggtgcgcgttgattttcag
ctcaatggcaagccggtctatagccattctcgtaccgataattatcgccctttaggcagc
agcaatcagtttcgcgacatcacggtcccgtcgctcaagcacccaggtatggctatccat
ctggtgtacctggatcccatggccgattacttccgttcactgcacgtcaccgcgccgctt
tccatcgccattggttttatggtgctgattatctttttctccgtgcgctggatccgtcgc
cagctggcgggccaggaacttctggagcttcgcactgcgcgtattcttaatggcgaacgt
ggaccgcaggtgcgagggtcggtgcacgagtggccagcaaacaccagtagcgcactggat
atgctgctatccgaacttcagttcgccagcgatcagcgaagccgcatggataccctgatt
cgttcctatgtcgcacaggattcaaaaaccggtctgagtaaccgattattttttgataat
cagctgtcgacgctgcttgaagatcaggagaaggtggggtcatacggcatcgttatgatg
atccgcctgccggatttcgacctgctgcgtgataactgggggcgcgcggcgaccgaagag
cattactttacgctgatcaacatgctttccactttcattatgcgctaccctggcgctttg
ctggctcgctaccatcgcagcgattttgccgtcctgcttccgcatcgcacgttaaaagag
gctgacagcattgccggcttgctattgaaagccatggacgccctgccgccgacgcgcatt
ctcgatcgtgacgatatgatgcatatcgggatctgcgctttccgtagcgggcaaacggcg
gctcaggtgatggaacatgcggaagcggcgacgcgcaatgcggtgctgcagggcagcaat
agctgggctgtttatgatgactctctgccggagaaagggcgtggcaacgtgcgctggcgt
acgcttatcgagcagatgctcagccgcggcgggccgcgactttaccagaaacctgcggtg
actcgtgatggtcgcgtacatcatcgcgaacttatgtgccgtctttatgatggtaaggaa
gaggtgatcgcggcggaatatatgccgatggtgctgcagtttggcctggcggaagagtat
gaccgcctgcaaattactcgactgctgccgtttttaggcttctggccggaagaaaacctc
gcgctgcaggtgacggttgagtccttaatccgccctcgattccagcgctggctgcgcgat
actttgatgcaatgcgaaaaatcacaccgtcgacgtattatttttgaacttgcagaggcg
gatgtttgtcaatatatcggccgcctgcagccggttatgcggttggttaacgctttaggt
attcggattgccgtggttcaggctggtctgacgctggttggaaccagctggatcaagcag
ctcgacgttgaagtgattaagctgcattcggggttatcgcgcaatatagaaaaacgcagt
gaaaatcagctgctggtccagagcctggttgaggcctgtaaaggaatgccggttcaggtt
ttcgctaccggcgtgctcagccgaagcgagtggcaggtgctgtctcaatgcggtgttacc
ggtggacagggggaattttttgccgcctcacagccacttgacacaaatgtgaaaaaatat
tcgcaaagatactctgtttga
DBGET
integrated database retrieval system
