Klebsiella sp. CTHL.F3a: K7H21_02930
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Entry
K7H21_02930 CDS
T08882
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
klc
Klebsiella sp. CTHL.F3a
Pathway
klc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
klc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7H21_02930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klc03019
]
K7H21_02930
03009 Ribosome biogenesis [BR:
klc03009
]
K7H21_02930
Enzymes [BR:
klc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K7H21_02930
Messenger RNA biogenesis [BR:
klc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K7H21_02930
Ribosome biogenesis [BR:
klc03009
]
Prokaryotic type
rRNA helicases
K7H21_02930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QZY80631
LinkDB
All DBs
Position
613563..615524
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AA seq
653 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD
VETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERSGE
DRPKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPERSGERRGGGERREGGRSFGGGERRE
GRGFGGERREGGRSEGRRFSGERREGGRAPRRDDASAPRRDDSAGRRRFGGDA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcccatccttgaagcg
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctg
ctgggcggccgcgacgttctgggtatggcccagacgggtagcggtaaaaccgcagcgttc
tctttaccgctgctgaacaacattgatcctgagctgagagcaccgcagattctggtgctg
gcgccgacccgcgaactggcggtacaggttgctgaagcaatgacggaattttctaaacat
atgcgcggcgtaaacgtggttgccctctacggcggccagcgttatgacgtgcagctgcgc
gcgctgcgtcagggaccgcaaattgttgtcggtaccccgggtcgtctgctggaccacctg
aaacgcggtacgctggatctctctaagctgagcggtctggttctggatgaagctgacgaa
atgctgcgcatgggcttcatcgaagacgtagaaacgattatggcgcagatcccggaaggt
catcagaccgctctgttctccgctaccatgccggaagcgattcgtcgtattacccgccgc
tttatgaaagagccgcaggaagtgcgcatccagtcgagcgtaacgactcgcccggacatc
agccagagctactggactgcttacggtatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gttgccgaagcgctggagcgtagcggctatagcagcgctgcgctgaatggcgacatgaac
cagtccctgcgtgagcagaccctggagcgtctgaaagacggtcgtctggatatcctgatt
gcgaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtggttaactac
gatatcccgatggattctgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgcgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgcacgatgaagctgaccattccggaagttgaactgccgaacgcagaactgctgggc
aaacgtcgcctggaaaaatttgccgcgaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctggcgaaaatccagccgtctgccgaaggtgaagagctggac
gtggaaacgctggccgcagcgctgctgaaaatggctcagggcgaacgtccgctgatcctg
ccgccggatgcgcctatgcgtcctaagcgcgagttccgcgaccgtgacgatcgttttgag
cgtcgtggcgaccgtaacgaccgtggcccgcgcggcgatcgtcctgaacgcagcggcgaa
gatcgtcctaagcgtgaacgtcgtgacgttggcgatatggaactgtaccggattgaagtg
ggccgtgatgacggtgttgaagttcgtcatatcgttggcgcaatcgccaacgaaggcgac
atcagcagccgttacatcggtaacatcaaactgtttggttctcactccaccatcgaactg
ccgaaaggtatgccgggcgaagtgctgcagcactttactcgtacccgcatcctgaacaag
ccgatgaacatgcagctgctgggtgatgctcagccgcgtcctgagcgcagcggcgaacgt
cgtggcggcggagagcgtcgtgaaggcggtcgtagcttcggcggcggtgaacgtcgtgaa
ggccgtggttttggcggcgagcgtcgcgaaggcggtcgtagtgaaggtcgtcgtttcagc
ggcgaacgtcgtgaaggcggccgcgcgccgcgccgcgatgatgcttcagctccgcgtcgc
gatgactccgcaggtcgtcgtcgtttcggtggcgatgcataa
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