Enterobacter lignolyticus G5: AO703_10195
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Entry
AO703_10195 CDS
T04198
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kle
Enterobacter lignolyticus G5
Brite
KEGG Orthology (KO) [BR:
kle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kle03019
]
AO703_10195
Enzymes [BR:
kle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AO703_10195
Messenger RNA biogenesis [BR:
kle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AO703_10195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
T2SSE
HA2_N
nSTAND3
NACHT
ResIII
AAA_16
AAA_11
PhoH
SLFN-g3_helicase
NTPase_1
TsaE
Motif
Other DBs
NCBI-ProteinID:
ALR76654
UniProt:
A0A806X4U0
LinkDB
All DBs
Position
2211732..2215634
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQPKLTFPILTTLLDGLMLRDRQRFSRRLHGVKKVKNPDAQQAILQEMAQEIEQAAGQ
VVLREAARPPITYPENLPVSQKKQAILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
VKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDSTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPQRFSRH
FNNAPVIEVSGRTYPVEVRYRPIVEDADDTERDQLQAIFDAVDELNHEGPGDILIFMSGE
REIRDTADALNKRDMRHTEILPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATAYKLTAQGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQ
LRQVVKELRIPVNSTPAEYREIHVALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE
KVTVYGLPVVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRDNLRLRAEVEELE
HKSRRRDILVDDETLFEFYDQRISHEVVSARHFDSWWKTVSRATPDLLSFEKSMLIKEGA
EGVSKLDYPNFWHQGSLKLRLSYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRATPLELPLLDSLERELRRMTGVTVDREDW
HWEQVPDHLKITFRVVDDKNKKLQEGRDLTALKETLKGKVQETLSAVADDGIEQNGLHLW
SFGSLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQDQQQAMWCGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEERFAALHEK
VRGELNDAVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMSGLVYRGFVTG
NGFKRLGDTLRYLQGIERRLEKLAVDPHRDRAQMLKVESVQQAWQQWLNKLPPARRDDAD
VQEIRWMIEELRISYFAQQLGTPYPVSDKRILQAMDQISA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaaccgaagttaaccttcccgatactcactacgctgctcgatggcctgatg
ctgcgcgacagacagcgcttcagccgccgcctgcatggggtaaaaaaggttaaaaatcct
gatgcacaacaggccattctccaggaaatggcgcaggagattgaacaggcagccggtcag
gtcgtgctgcgcgaagcggcgcgcccgccgataacgtatccggaaaatctgccggtcagt
cagaaaaaacaggccattctggaggcggtgcgcgaccaccaggtggtgattgtcgccggt
gagaccggttcggggaaaaccacccagctgccgaagatttgtatggagctggggcgcggg
gtgaaagggcttattggccacacccagccgcgccgtctggcggcgcgaaccgtggcgaac
cgtatcgccgaagagctgcaaacggagccggggggctgcatcggctataaggtgcgcttt
agcgatcacgtcagcgacagcaccatggtgaagctgatgaccgacggtatcctgctggcg
gaaatccagcaggaccggctgctgatgcagtacgacaccattattatcgacgaagcgcac
gagcgcagcctgaacatcgacttcctgctgggctacctgaaggagctgctgccgcgccgt
ccggatctgaagattatcatcacctcggcgacgatcgacccgcagcgcttctcacgccat
ttcaacaatgcgccggtgattgaggtttccgggcgcacgtatccggtggaggtccgctat
cgcccgatagtggaggacgccgatgataccgagcgcgatcagctgcaggcgattttcgac
gccgtcgacgagctgaatcacgaagggccgggcgatatcctgatattcatgagcggcgag
cgcgaaattcgcgatactgccgatgcgctgaacaagcgggatatgcgccataccgaaatc
ctgccgctgtatgcgcggttgtcgaacagcgagcagaaccgggtattccagccgcacagc
gggcggcgtatcgtgctggcgaccaacgtcgcggaaacgtcgctgaccgtgccgggcatc
aagtacgttattgacccgggtaccgcgcgcatcagccgctacagctatcgcaccaaggtg
cagcgcttaccgatcgagcccgtatcgcaggcctccgccaaccagcgtaaaggccgctgc
gggcgcgtatcggaagggatctgcatccgtctttattccgaagacgatttcctctcgcgt
ccggagtttaccgacccggaaattctgcgcactaacctggcctcggttattctgcagatg
accgcgctggggctgggtgatatcgcggcctttccgttcgtggaagcgccggacaagcgc
aacattcaggacggcgtgcggttgcttgaagagctgggcgcgattaccaccgacgagcag
gcgacggcctataagctgacggcgcagggccgccagctcagccagctgccggtcgacccg
cgcctggcgcggatggtgctggaggcgcaaaagcacggctgcgtgcgcgaggcgatgatc
atcacctcggcgctctcgattcaggatccgcgcgagcgcccgatggacaagcagcaggcg
tccgacgaaaaacaccgtcgttttcacgacaaagagtccgatttcctggcctttgtgaac
ctgtggaactacctgggtgagcagcagaaggcgctgtcgtcgaaccagttccgccgcctg
tgccgcaccgactacctcaactacctgcgcgtgcgcgagtggcaggacatctacacccag
ctgcgtcaggtggtgaaggagctgcggatcccggttaacagcacgcctgcggagtaccgc
gagatccacgtcgcgctgctgaccgggctgctgtcgcatatcggcatgaaggatgcggat
aaacaggagtttaccggtgcgcgcaacgcccgcttctcgattttccccggctccggtttg
ttcaaaaagccgccgaagtggaccatggtcgcggagctggtggaaaccagccgcctgtgg
gggcgcattgccgcgcgcattgagccggagtgggtggagcccgtcgcccagcacctgatc
aagcgctcatacagcgagccgcactgggagcgcgcgcagggggcggtaatggccacggaa
aaagtgaccgtttacggcctgccggtggttgccgcgcgcaaggtcaactacagccagatt
gacccggcgctgtgccgcgagctgttcatccgccacgcgctggtcgagggcgactggcaa
acgcggcatgcgtttttccgcgacaacctgcggctgcgcgctgaagtcgaagagctggag
cacaaatcgcgccgccgcgacatcctggtggacgacgaaacgctgtttgaattttacgac
cagcgtatcagccacgaggttgtttccgcccgccactttgacagctggtggaaaacggtc
agccgcgcgacgccggatctgctcagctttgaaaagagcatgctcatcaaagagggcgcg
gagggcgtcagcaagctggattacccgaatttctggcaccagggcagcctgaagctgcgc
ctgagctaccagttcgagccgggggcggacgcggacggcgtcaccgtgcacatcccgctg
ccgctgctcaaccaggtggaggaggccgggtttgaatggcaaatcccggggctgcgccgt
gagcttatcattgcgctgatcaagtcgctgcccaaaccggtacggcgaaactttgttccg
gcgccgaactatgcagaagcgtttttaggccgcgccacgccgctggagctgccgctgctc
gactcgcttgagcgcgagctgcggcggatgaccggggtgaccgttgaccgtgaagactgg
cactgggaacaggtgcccgatcatctgaaaatcaccttccgggtggtggatgataagaat
aaaaagctgcaggagggacgtgacctcacggcgctgaaggagacgctgaaggggaaagtg
caggagacgctgtcggcggtcgcggatgacggcatcgagcagaacgggctgcacctgtgg
agcttcggctcgctgccggaaagctatgagcagaagcgcggtaactacaaggtgaaagcc
tggcccgcgctggtggacgagcgcgacagcgtggcgattaagcttttcgacaatccacag
gatcagcagcaggccatgtggtgcggcctgcgccgcctgctgctgctgaatatcccgtcg
ccgatcaaatacctgcacgagaagctgccgaataaggccaagctggggctctattttaac
ccctacggcaaagtgctggatttgattgacgactgcatctcctgcggcgtggataagctg
attgatgaagcgggcggcccggtgtggacggaagaacgttttgccgcgctgcatgagaag
gtccggggcgagctcaacgacgccgtggtggagatagccaaacaggtcgaacagatcctg
accgcggtgtttaacatcaataaacgcctgaaagggcgcgtggacatgaccatggcgctg
gggctgtcggacgttaaggcgcaaatgagcggtctggtgtatcgcggcttcgtcaccggc
aacggctttaagcggttgggcgatacgctgcgctatctgcagggcattgagcgccggctg
gagaagctggcggtcgatccgcaccgcgaccgtgcgcagatgctgaaggttgaaagcgtg
cagcaggcgtggcagcagtggctgaacaagctgccgcccgcccgccgcgacgatgcggac
gttcaggagatccgctggatgattgaggagctgcgcatcagctacttcgcccagcagctc
ggtacgccgtatccggtctccgataagcgtatcctgcaggcgatggatcagattagcgcc
tga
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