Klebsiella sp. LTGPAF-6F: BJF97_01005
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Entry
BJF97_01005 CDS
T05751
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kll
Klebsiella sp. LTGPAF-6F
Pathway
kll03420
Nucleotide excision repair
kll03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJF97_01005
03430 Mismatch repair
BJF97_01005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kll03400
]
BJF97_01005
Enzymes [BR:
kll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJF97_01005
DNA repair and recombination proteins [BR:
kll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJF97_01005
MMR (mismatch excision repair)
Other MMR factors
BJF97_01005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOV09696
UniProt:
A0AAN1DTB4
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All DBs
Position
215538..217700
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVEHCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
SGRLGKKLWTDGADGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLKDKVLAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPESCVEEVRLRATVSRPVSHQRMG
TPMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttatctgctcgacagccttaatgacaaacagcgtgaagccgttgcggca
tcacgtactaacatgctggttctggcaggcgcgggcagcggtaagacgcgcgtactggta
caccgcatcgcctggctgctgagcgttgagcactgttccccttactccattatggcggtg
acctttaccaacaaagcggcggcggaaatgcgccatcgtattggccaactgatgggtacc
acccagggcggtatgtgggtcggcactttccacgggctggcgcaccggctgctgcgcgct
catcaccttgacgccaacctgccgcaggacttccagatcctcgacagcgaagaccagctg
cgcctgctcaagcgtctgattaaggcgatgaatctcgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggccagaaagatgaagggctgcgcccgcaccatatacag
agctacggtaacccggttgagcagacctggcagaaagtttatcaggcctaccaggaggcc
tgcgatcgggcggggctggtggatttcgccgaactgctgctgcgcgcccacgaactgtgg
ctcaacaagccgcacattcttcagcactaccgcgagcgctttaccaatatcctggtggac
gaatttcaggataccaacaacattcagtacgcgtggatccgcctgctggcgggcgatacc
ggcaaggtgatgatcgtcggcgatgacgatcagtccatttacggctggcgcggcgcgcag
gtggagaacatccagcgcttcctcaacgatttccccggcgcggaaactatccgcctcgag
caaaactatcgctcgaccagcaatatcctcagcgcggccaacgccctgattgaaaacaac
agcgggcgcctggggaaaaagctgtggaccgacggtgccgacggcgagccgatttcgctc
tactgcgcgtttaacgatcttgatgaggcgcgctttgtcgtcaaccgcatcaaaacctgg
caggaaaacggcggggcgctggagcagtgcgcgattctgtatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcaggccagcatgccgtatcgtatttatggcggcatg
cgcttcttcgaacgccaggagatcaaagatgcgctctcctatctgcgcctgatcgccaat
cgtaatgacgacgcggcctttgagcgcgtggtgaataccccgacgcgcggtatcggcgat
cgcacgctggacgtggtgcgccagacctcgcgcgaccgtcagctgacgctgtggcaggcc
tgtcgcgagctgttaaaagataaagtgcttgccggacgcgccgccagcgccctgcagcgt
tttatggagctcattgacgccctggcgcaggaaaccgccgatatgccgctgcacgtgcag
accgatcgggtgattaaagactccggcctgcgcatgatgtacgagcaggagaaaggcgag
aaaggccagacgcgcattgaaaacttagaggagctggtgacggcaacgcgccagttcagc
tacaacgaagaagatgaagatttgatgccgctgcaggcgttcctctcgcatgcggcgctg
gaagcgggagaagggcaggcggatacctggcaggatgcggtacagctgatgaccctgcac
tcggcgaaagggctggagttcccgcaggtctttatcgtcggcgtggaagaggggatgttc
ccgagccagatggcgcttgatgagggcggccgcctggaagaagaacgccgtctggcctac
gtcggcgtcacccgcgcgatgcagaagctcacgctgacctatgcggaaacccgccgcctg
tatggcaaagaggtttatcaccgcccgtcgcgctttatcggcgagctgccggagtcgtgc
gtggaagaggtgcggctgcgcgccacggtgagccgtccggtcagccatcagcggatgggg
acgccgatggcggaaaacgacaccggctataagctgggccagcgcgtgcgccatgccaag
tttggcgaaggcacgatcgtgaacctcgaaggcagcggcgaacacagccgcctgcaggtt
gcgtttcaggggcaggggattaaatggctggtcgcggcgtatgcccggcttgaaacagtg
taa
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