Klebsiella sp. LTGPAF-6F: BJF97_01730
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Entry
BJF97_01730 CDS
T05751
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
kll
Klebsiella sp. LTGPAF-6F
Pathway
kll03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJF97_01730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kll03400
]
BJF97_01730
DNA repair and recombination proteins [BR:
kll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJF97_01730
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJF97_01730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
NACHT
AAA_21
Viral_helicase1
cobW
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AOV09821
UniProt:
A0A1D8JM86
LinkDB
All DBs
Position
complement(366094..368919)
Genome browser
AA seq
941 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGQRLMLLAPIIKERKGEHNKTLENLAGQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLSTRLAESFETALELSGGTAIVANMDDP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPERVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYEFDVEAPWGTLNSSVQKVVLYGSGKENIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCTSCEGTRLKREARH
VFVENTPLPTISDMSIGHAMDFFNNLKLSGQRAQIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGKLEDIMAVPESLTGQFMSGKRKIEV
PKQRVPANPEKVLKLSGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASYTARFLKPMLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccacaatctcaaaaatatcaacctcgtc
atcccgcgcgacaaactcattgtcgtcaccgggctttcgggttcaggcaaatcctcactg
gctttcgacacgttgtatgccgaagggcagcgtcgctacgttgagtcgctctccgcctac
gcgcggcagttcctgtcgctgatggagaagcccgacgtcgaccatattgaagggctgtcg
ccggcgatttccattgaacagaaatcaacgtcccacaacccccgttcaacggtaggcacc
attaccgaaattcacgactacctgcgtctgctgtacgcgcgcgtcggcgagccgcgctgc
ccggatcacgacgttccgctggcggcgcaaaccgtgagccagatggtcgataacgtgctc
tcccagccagaaggccagcgcctgatgctgctggcgccgatcattaaagagcgcaaaggc
gagcataacaaaacgctggaaaatctcgccgggcagggctacatccgcgcgaggatcgac
ggcgaggtctgcgatctctccgatccgccgaagctggagctgcagaagaaacacaccatt
gaagtggtgattgaccgcttcaaggtgcgcgacgatctcagcacgcgcctggccgagtct
tttgaaaccgcgctggagctgtcgggcggtaccgccatcgtcgccaatatggacgatccg
aaagccgaagaactgctattttccgccaacttcgcctgcccgatttgcggctacagcatg
cgcgaactggaaccgcgcctgttctccttcaacaacccggctggcgcttgcccgacctgc
gatggtctcggcgtccagcagtatttcgatccggaacgcgtcattcagaacccagagctg
tcgctggctggcggggcgattcgcggctgggatcggcgcaatttttactactttcagatg
ctgaagtcgctggcggaacattatgaattcgatgtggaggcgccctggggcacgctgaat
agcagcgtacaaaaagtggttctgtacggctcaggcaaagagaatattgaattcaaatat
atgaacgatcgcggcgatacctcggtgcgccgccatccgttcgaaggcgtgctgcataat
atggagcgccgttataaagagacggaatccagcgcagtacgtgaagagttagcgaaattc
atcagcaaccgtccctgcaccagctgtgaagggacccgcctgaagcgcgaagcgcggcac
gtgtttgtggagaataccccgctgccgaccatctcggatatgagcatcggccacgcgatg
gacttcttcaacaacctgaagctctccggccagcgtgcgcaaattgctgaaaaagtactg
aaagagattggcgatcgcctgaaattcctcgtcaacgtcggtctgaactacctgacgctc
tcccgttcggcggaaaccctttccggcggcgaagcgcagcgtatccgcctcgccagccag
atcggcgcaggcctggtcggcgtcatgtacgtactggatgagccctctatcggcctgcac
cagcgcgataacgaacgcctgctgggcacgctgatccacctgcgaaacctcggcaacacc
gtgattgtcgttgagcacgatgaagacgccattcgcgccgccgaccacgttatcgatatc
ggtccgggggctggggtacacggcggtcaggtcgtggctgaaggcaagctggaagatatt
atggcggtgccggaatcgctgaccggccagttcatgagcggcaagcgtaaaatcgaagtg
ccgaaacagcgcgtacccgccaatccggagaaagtgctgaagctgtccggcgcgcgcggc
aacaacctgaaagacgtgacgctgacgctgccggtgggcctcttcacctgtatcaccggc
gtttccgggtcgggtaaatccacgctgatcaacgacacgctgttcccgattgcccagcgt
cagctcaacggtgccaccatcgcggaaccggcaccttaccgcgacgtgcaggggctggaa
catttcgacaaagtgatcgatatcgaccagagccccatcggccgtacgccgcgttctaac
cccgcaacctacaccggcgtctttacgccggtccgtgaactgtttgccggcgtacctgaa
tcacgttcgcgtggctacacgcccggccgattcagttttaacgtgcgcggcggtcgctgt
gaagcctgccagggcgatggcgtgatcaaagtcgagatgcacttcctgccggatatctac
gtaccgtgcgaccagtgcaaaggcaaacgctataaccgcgaaacgctggagattaagtac
aaaggcaaaacgattcatgaagtgctggatatgaccattgaagaagcgcgtgagttcttc
gatgcggttccggcgctggcgcgtaagctgcaaacgctgatggacgtcggtctgacctat
attcgccttggtcagtcggctaccacgctttccggcggcgaggcccagcgcgtcaagctg
gcgcgcgagctgtccaaacgcggtacagggcaaacgctgtatatccttgatgagccgacc
accggtctgcactttgccgatattcagcagttgctggaggttctgcaccagctgcgcgac
caggggaataccatcgtggtgattgagcacaacctggatgtcatcaagacggctgactgg
atcgttgaccttgggccggaaggcggaagcggcggcggagagattctcgtttccggtacg
ccggaaacggtcgccgagtgcgaggcctcctatacggctcgcttcctcaagcccatgctg
aagtaa
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