Klebsiella sp. LTGPAF-6F: BJF97_09470
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Entry
BJF97_09470 CDS
T05751
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kll
Klebsiella sp. LTGPAF-6F
Pathway
kll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJF97_09470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kll03019
]
BJF97_09470
Enzymes [BR:
kll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BJF97_09470
Messenger RNA biogenesis [BR:
kll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BJF97_09470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
AAA_22
Rubella_Capsid
Motif
Other DBs
NCBI-ProteinID:
AOV11244
LinkDB
All DBs
Position
2028120..2029469
Genome browser
AA seq
449 aa
AA seq
DB search
MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QHLIQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSINPQMM
KLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI
ERLLKKEIPRIALAGYEPDPSIKAEPIQNGRQQQRGGGRGGQSQGRGGQGQGRGQQSAPR
RTDGEASKARTQDGKPPRRRRPRKPAAAE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaatcctgaaatcctgcgcgccgtcgctgagcagggc
tacgttgagccaaccccaattcagcagcaggctatcccggcagtattacagggtcgcgat
ctgatggccagcgctcagaccggtaccggcaaaacggcgggatttacgctgccgctgctt
cagcatctgatccaaaaggagccgcatgctaaagggcgtcgcccggtgcgtgcgctgatc
ctgaccccaacgcgcgagctggcggcgcaaattggcgagaacgtccgtgattacagcaaa
tacctcaacgttcgctcgctggtggtgttcggcggcgtgagcattaatccgcagatgatg
aagctgcgcagcggcgtcgatatcctggtggcaacgccgggtcgtctgctggatcttgaa
catcagaacgccgtgagcctcgacaaagtcgaagtgctggtgctggacgaagccgaccgt
atgctggatatgggctttattcacgatattcgccgggtgctggcgaagctgccggccaga
cgtcagaacctgctgttctccgcaaccttctccgatgacattaaatcgctggcggaaaag
ctgctgcataacccgctggagatcgaagtcgcccgccgcaacaccgcctctgagcaggtg
agccagctggtgcattttgtcgataaaaagcgcaaacgcgagctgctgtcgcagatgatc
ggtgaaggtaactggcagcaggtgctggtctttacccgcaccaagcacggcgcaaaccat
ctggcggaacagctcaataaagacggcatccgcagcgccgctattcacggcaacaagagc
cagggcgcgcgtacccgcgcattggctgactttaaatccggcggcattcgcgtactggtg
gccaccgatatcgccgcgcgcggtctggatattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtaccggaagactatgtgcaccgtatcggtcgtaccgggcgcgccgcg
gcaacgggtgaagcgctgtcgctggtttgcgttgatgaacataaactgctgcatgatatc
gaacgcttgctgaaaaaagagatcccgcgtattgccctggcgggctacgagccggatcca
tcgattaaagccgagccgattcagaacggtcgtcagcagcagcgcggcggcggtcgcggt
ggccagagtcagggccgcggtggccaggggcaaggtcgcggtcagcagtccgctccgcgt
cgtaccgatggcgaagcgtcgaaagcgcgaactcaggacggtaagcctcctcgccgtcgt
cgcccgcgtaaacccgccgcggcggagtaa
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