Klebsiella sp. LTGPAF-6F: BJF97_23840
Help
Entry
BJF97_23840 CDS
T05751
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kll
Klebsiella sp. LTGPAF-6F
Pathway
kll03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BJF97_23840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kll03400
]
BJF97_23840
Enzymes [BR:
kll01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BJF97_23840
DNA repair and recombination proteins [BR:
kll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJF97_23840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AOV13890
LinkDB
All DBs
Position
complement(5101303..5104848)
Genome browser
AA seq
1181 aa
AA seq
DB search
MTDTAESLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGESAFPRQVSVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYAGLLAEIADKTQAAQTLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLPRDIA
AVIHEAWKGPRDLLKSIDRWLQGEAPQLKSPPPADETLAERHQQIIERINALKQQWLAQV
GEVEAVLENSGLDRRKFNRGNQGKWLEKVTAWAQEETLSYQLPDALEKFSQAFLLERTKA
DGAPPVHPLFSAVEALLATPLTLTDLVIARAMVEIREAVAREKRRRGELGFDDMLSRLDD
ALRGESGEALASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRRQADTALLLIGDPKQAIY
AFRGADIFTYMKARGDVTAHYTLDTNWRSAPGMVDSVNRLFSLSDNPFMFREIPFMPVKS
ADKNQGLRFTVDDAAVPAMNIWLMSGEAVGAGDYQAFMAQLCAAQIRDWLSAGQQGKALL
WRGEKAEPVRASDITVLVRNRQEASLIRDALQLLSIPSVYLSNRDSVFETPEAQELLWVL
QAVLAPERENTLRSALATAMFGLNAQDIENLNQSERAWDELVEEFSGYRQVWRQRGVMPM
LRALMTARRIAENLLATSGGERRLTDILHISELLQEAANQLESEHALVRWLAQHIAEPDS
NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRTSFAAVLDL
GQAEGSMELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSTRRSDKPGASDFHHSALGR
LLQGGEAMDAAGLMARLQAFCSGEIALQLPYTAAPTPWQAPQAALPPLSARLLARSVTDD
WRVTSYSGLQQNGHSAAQDLLPRLDVDAAGVGEVAEEPQLTPHQFPRGASPGTFLHSLFE
DLDFTQPVPADWMAARLQLSGFEEKWTPVLTAWLDGVLRTPLPGAGIALNQLSEGDKQVE
MAFYLPIEQPLDPLRLDALIRQYDPLSVDTPTLDFRQVRGMLKGFIDLVFRHNGRYYLLD
YKSNWLGENREAYTQDAMRQAMRSHRYDLQYQLYSLALHRYLRHRIADYDYERHFGGVIY
LFLRGMDGQDGGQGIFATRPALPLINGLDALFAGETQEVVL
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgccgagtctcttgacccactgcgcttgcccctgacgggcgagcgcctg
atagaagcctctgcgggcacaggaaaaacctttaccattgccgccctctatctgcggctg
ctgctggggctgggcggggaatccgcctttccccgccaggtcagcgtggaagagctgctg
gtagtgacctttaccgaagcggcgaccgaagagctgcgcgggcgtattcgcagcaatatc
cacgagctgcgtatcgcctgcctgcgcgaaagtaccgacaatcccctctacgccgggctg
ctggcggaaatcgccgataaaacccaggcggcgcaaacgctgctgctggccgaacggcag
atggacgaagcggcggtatttaccattcacggcttctgccagcggatgctgagccttaac
gcctttgagtccggcatgctgttcgaacagcagctgattgaagatgaatcccgcctgcgc
tatcaggcctgcgccgacttctggcgtcgccactgctatccgctgccgcgtgacatcgcg
gcggttatccacgaagcgtggaaagggccgcgcgatctgctgaaatccatcgaccgctgg
ctacagggagaggcgccgcagctcaaatcgccgccgccggctgacgaaacgctggccgaa
cgccatcagcaaattatcgaacgcatcaacgcgctgaagcagcagtggctggcacaggtg
ggcgaggttgaggcggtgctggaaaactcgggcctcgaccggcgcaagtttaatcgcggc
aatcaggggaaatggctggagaaagtgaccgcctgggcccaggaagagaccctgagctac
cagcttccggatgcgctggagaagttctcccaggccttcttgcttgagcgcaccaaagcg
gacggcgcgccgccggtacacccgctgttcagcgcggtagaagcgctgctggcgacaccg
ttaaccttgaccgatctggtgattgccagggcaatggttgaaatccgcgaagcggtcgcg
cgggagaaacgccgccgcggcgagctgggctttgacgatatgcttagccgcctggatgac
gccctgcgcggggagagcggcgaagcgctggccagcgcgattcgccagcgctttccggta
gcgatgatcgacgaatttcaggataccgacccccagcagtaccgaatctttcgccgcatc
tggcggcgtcaggcagacaccgcgctgctgctgattggtgatcccaagcaggccatttac
gccttccgcggcgcggatatctttacctacatgaaagcgcgtggggacgtcaccgcccac
tatacgctcgataccaactggcgctccgcgccggggatggttgatagcgtcaatcgcctg
tttagcctcagcgataacccctttatgttccgcgaaatcccgtttatgccggtgaagtcg
gccgataaaaaccaggggctgcgctttaccgtcgatgatgctgcggtaccggcgatgaat
atctggctgatgtcgggcgaggccgtcggggcgggggattaccaggcgtttatggcccag
ctgtgcgcggcgcaaattcgcgactggctcagcgcgggccagcagggcaaggcgctgctg
tggcgcggtgaaaaagctgaacccgtgcgggcttcggacatcacggtgctggtgcgcaat
cgtcaggaggcgtcgttaattcgcgatgcccttcagctgctgtcgattccctccgtttat
ctctccaatcgcgatagcgtgtttgaaacccccgaggcgcaggagctgctgtgggtgctg
caggcggtgctggcccccgagcgggaaaataccctgcgcagcgcgctggcgaccgcaatg
ttcggcctcaacgcgcaggacattgaaaacctcaaccagagcgaacgggcctgggatgag
ctggtagaagagtttagcggctaccggcaagtctggcggcagcgcggcgtgatgccgatg
ctgcgcgcgctgatgaccgcgcggcgtattgccgaaaacctgctggcgaccagcggcggc
gagcggcgcctgaccgatatcctgcatatcagcgagctgctacaggaggcggcgaaccag
ctggagagcgaacatgcgctggtgcgctggctggcgcagcatatcgccgagccggatagc
aacgcctccagccagcagatgcgcctggagagcgataagcacctggtgcagatcgtcacc
atccataaatcgaaagggctggagtatccgctggtctggctgccgtttattgcgcgtttc
cgtaaacaggatcaggcgttttatcacgacagaacttcctttgccgccgttctcgacctg
gggcaggcggagggcagcatggagctggcggaggccgaacgcctggccgaagatctgcgc
ctgctttacgtcgcgctgacccgtgcggtctggcactgcagccttggcgttgcgccgctc
agcacccggcgcagcgacaagcccggcgccagcgattttcaccacagcgcgctgggccgc
ctgctgcagggcggggaagcgatggatgccgcagggctgatggcccgcctgcaggcgttc
tgcagcggggagatcgccctgcagctcccgtatacggctgcgccaacgccgtggcaggct
ccgcaggcggcgctaccgccgctttcagcccgtttgctcgcgcgttcggtgaccgatgac
tggcgggtcaccagctactccggcctgcagcagaatggacacagcgcggcgcaggatctt
ctgccgcgtctggatgtcgatgccgccggcgtcggtgaggtcgcggaagagccgcagctt
actccgcaccagttcccccgcggcgcgtcgccggggacgtttctccacagtttgttcgaa
gatctcgattttacccagccggttcccgccgactggatggcggccaggctccagctgagc
ggcttcgaggaaaagtggaccccggtactgaccgcatggctcgacggcgtgctgcgtacc
cctctgcccggcgcgggcatcgcccttaatcagctgagcgaaggcgataaacaggtggag
atggcgttttatctgcccatcgaacagccgctggatcccctgcgtctggatgcgctgatt
cgtcagtacgatccgctctccgtggataccccaacgctcgatttccgccaggtgcgtggg
atgctgaaaggctttatcgacctggtgtttcgccacaacggccgctattacctgctggat
tacaaatccaactggctgggggaaaatcgcgaggcctatacccaggacgcgatgcggcag
gcaatgcgttcgcaccgttacgatttgcagtatcagctctatagcctggcgctgcaccga
tatttacgccaccgcattgccgattatgattacgaacgccacttcggcggcgttatttat
ctctttttacgcggcatggacgggcaggacggcgggcagggtatcttcgccacccggccg
gcgctgccgctgattaacggcctcgatgcgctgtttgccggggaaacccaggaggttgtg
ctatga
DBGET
integrated database retrieval system
