Klebsiella sp. M5al: BWI76_05030
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Entry
BWI76_05030 CDS
T09148
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
klm
Klebsiella sp. M5al
Brite
KEGG Orthology (KO) [BR:
klm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klm03019
]
BWI76_05030
Enzymes [BR:
klm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BWI76_05030
Messenger RNA biogenesis [BR:
klm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BWI76_05030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
DEAD
Helicase_C
DUF99
DUF2732
Motif
Other DBs
NCBI-ProteinID:
ARI06937
LinkDB
All DBs
Position
1053572..1056001
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AA seq
809 aa
AA seq
DB search
MSSLPVAAVLPELLSALRHAPQVLLNAPTGAGKSTWLPLQILAQGKINGRIILLEPRRLA
ARNVAQRLAELLGEKPGETVGYRMRAETCVGPNTRLEVVTEGILTRMIQRDPELSGVGLA
ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNERLQRLLPEAPVIVSEGRA
FPVERRFQPLATHQRFDEAVAIAAAELLRSENGSMLLFLPGVGEIQRVQERLAERVASDV
VLCPLYGALPLSEQRKAILPAPVGMRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDA
RTGLTRLVTQRISQASMTQRAGRAGRLEPGICLHLLAKEQAERAAAQGDPEILQSDLSSL
LLELLQWGCQDPAQLSWLDLPPAVNLAAARRLLTDLSALEGERLSSHGRKMAALGNDPRL
AAMLTAAEDADGAATAAKLAAILEEPPRGGNSDLSAAFARQQGNWQQRAQQLIKRLAVRG
GQPDADRIAALLASAFADRIAHRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPLLLQG
SSSPDARILLALPVEINALIERCPALVQRSDIVEWDEALGTLKAWRRTCIGRLVIKTQPL
AKPSEEELHQAMLNGIREKGLSVLNWTPEAEQLRLRLHCAAQWLPEEAWPAVDEASLLAS
LEQWLLPQMTGVHSLRALKALDVRQALQNWLPWPLRQKLDSELPTHYTVPTGSRIAIRYH
DDNPPALAVRMQEMFGEATTPTIAQGRVPLVLELLSPAQRPLQITRDLGAFWQGSYREVQ
KEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcattgccggttgccgccgtcctccctgaacttctttctgctctgcggcatgcg
ccgcaggttctgcttaatgcgccaaccggcgccgggaaatccacctggctgccgttgcaa
atcctcgcgcagggtaaaattaacgggcgcattatcctgctggagccgcggcggctggcg
gcgcgtaacgtggcgcagcggctggcggaactgctgggggagaagcccggcgagaccgtg
ggctaccgcatgcgcgccgagacctgcgtcgggccgaacacgcgcctcgaagtggtgacg
gaaggtattttgacgcggatgatccagcgcgatccggagctgagcggcgtggggctggcg
atcctcgatgagttccacgagcgcagcctgcaggcggatctggcgctggcgctgctgctc
gacgtccagcaggggctacgcgacgatctcaagctgctgattatgtcggcgacgctcgat
aatgagcgcctgcagcgtctgctgccggaggcgccggttatcgtttccgaagggcgcgcg
tttccggttgagcggcgttttcagccgctggcgacccatcagcgttttgacgaggcggtg
gcgattgccgccgcggaactgctgcgtagcgaaaacggttcaatgctgctgtttctgccc
ggcgtcggcgagatccaacgggtacaggagcggctggcggagcgggtggcgagcgatgtt
gtgctgtgcccgctgtacggcgcgctgccgctgagtgagcagcgcaaggcgatactgcct
gcgcccgtcgggatgcgcaaggtggtgctggcgaccaatatcgccgaaaccagtctgacc
attgaggggattcgtctggtggtagatagcgcccaggagcgcgtcgcccgctttgacgcc
cgcaccgggcttacccgcctggtcacgcagcgcatcagccaggcctcaatgacccagcgc
gccggacgcgccgggcgtctggaaccggggatctgtctgcatctgcttgctaaagagcag
gccgagcgcgcggcggcgcagggcgatccggaaatcctgcaaagcgacctgtcttcactg
ttgctggagttgttgcagtggggatgccaggacccggcgcagcttagctggctggatctg
ccgcctgcggttaatctggcggcggcccggcgtctgctcaccgacctttctgcgctggaa
ggcgagcggctgtcgtcgcacgggcgcaaaatggcggcgttgggcaacgatccgcgtctg
gcggcgatgctgaccgcggcggaggatgccgatggcgccgccacggcggctaagctggcg
gcgatcctggaagagccgccgcgcggcggcaatagcgatcttagcgcggcgtttgcccgt
cagcagggcaactggcagcagcgggcgcagcagttgataaaacggctggcggtgcgcggc
ggtcagcctgacgccgacagaatcgcggcgctgctggcctccgcttttgccgaccgtatc
gcccatcgtcgcggccaggaggggcgctatcagctggccaacggaatgggggcgatgctc
gacgccgacgatgcgctgggccgccacgagtggctgatcgcgccgctgctgctgcaggga
agttcatcgccggatgcgcggatcctgctggcgctgccggtagagattaacgcgctgatt
gagcggtgtccggcgctggtccagcgctccgatatcgtcgagtgggatgaggcgttaggc
acgctgaaggcctggcggcgtacctgtatcggacggctggtgattaaaactcaaccgctg
gcgaagccgtcggaagaggagctgcatcaggcgatgctcaacggcatccgcgaaaagggg
ctgagcgtgctcaactggacgccggaggcggagcagctgcgtttgcgcctgcactgcgcg
gcgcagtggctgccggaggaggcgtggccagccgttgatgaggcatcgctgctggcatcg
cttgagcagtggctgttaccgcagatgacgggcgtccattctctgcgcgcgctgaaggcg
ctggatgtgcgtcaggcgctgcaaaactggctgccgtggccgctgcgccagaagctggac
agcgagctacccacgcactatacggtgccgaccggtagccgcatcgcgattcgttatcac
gatgataaccctccggcgctggcggtgcggatgcaggagatgtttggcgaggcgacgacc
ccgactatcgcccaggggcgggtgccgctggtgctggagctactgtcgccggcgcagcgc
ccgctgcagatcacccgcgatttaggcgcattctggcaggggagctaccgcgaggtgcaa
aaagagatgaaagggcgctatccgaagcacgtctggccggacgatccggccaataccgcc
ccgacccggcgcaccaaaaaatattcgtaa
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