Klebsiella sp. M5al: BWI76_11040
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Entry
BWI76_11040 CDS
T09148
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
klm
Klebsiella sp. M5al
Pathway
klm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
klm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWI76_11040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klm03019
]
BWI76_11040
03009 Ribosome biogenesis [BR:
klm03009
]
BWI76_11040
Enzymes [BR:
klm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BWI76_11040
Messenger RNA biogenesis [BR:
klm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BWI76_11040
Ribosome biogenesis [BR:
klm03009
]
Prokaryotic type
rRNA processing factors
BWI76_11040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Motif
Other DBs
NCBI-ProteinID:
ARI08036
LinkDB
All DBs
Position
complement(2328509..2331757)
Genome browser
AA seq
1082 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNSHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAENRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIETRQTDVRVIIVPNDQME
TPHYSVLRVRKGEETSTLSYLLPKLHEEEMAMPSDEEPAERKLPEQPALAAFVMPEAPPA
PAQEEPTRATATVTPAASAPKAAAPAQPGLIARFFSALKNMFSGAEETKPAEVQVEKKAE
EKSERQQERRKPRSNNRRDRNDRRDNRDNRDSRDNRDSRAENSEGRESREENRRNRREKQ
QNAEPREIRQTTVEDSEKGKARDEQQPRRERNRRRNDDKRQVPQEAKTQTREEPIVQDSE
QEERVQTMPRRKPRQLAQKVRFESAAAEQVVEPVAAAQVTEAPVVQPETVAPRTELAKVD
LPAVVETAAEHDDNGEARESNGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVA
CASPEMASGKVWIRYPVVRPQDQQQEDAPVQEFSVAAAEPIITPAAAAEPVVSEVIAPAA
AEDSAAISEPVAVINEPEVPVVETTHPEAIATPVDEQPQLIAKADEAVVEDVVAEAVEVD
AKDAVEPEATAPVSEPVVAEPAAAEEAPEVVEEAPVVSAPAPVAEPVVEAKPALEAAPVV
KVANRHATAPMTRAPAPDYVPEAPRQSDWVRPNFDFDGKGSAGGHSATHKATAGPTRPQS
VE
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcagcaggaagagttgcgcgtcgcccttgttgat
gggcagcgcctgtacgacctggatatcgaaagccccgggcacgaacagaaaaaagcgaac
atctacaaaggcaaaatcactcgtatagaacctagcctcgaagccgcgtttgttgattat
ggtgccgagcgtcatggtttcctccctcttaaagaaatcgcccgcgaatacttccctgcc
aattacaattctcatggtcgtccgaacatcaaggacgtgctgcgtgaaggtcaggaagtt
attgtccagattgataaagaagagcgtggcaataaaggcgccgcgctgacgacctttatt
agcctggcgggcagctatctggtgctgatgccgaataacccacgcgctggcggtatttca
cgccgcatcgagggtgacgatcgcaccgaacttaaagaagcgctggccagccttgagctg
ccggacggcatgggacttatcgttcgcaccgccggcgtcggcaagtccgccgaagcgctg
cagtgggacttaagcttccgcctgaagcattgggaagccatccagaaagccgcagaaaat
cgccctgctccgttcctgatccatcaggaaagcaacgtgattgtgcgcgcgttccgcgac
tatctgcgccaggatatcggcgaaattctgattgataacccgaaagtgcttgagctggct
cgccagcacatcgcggcgctgggtcgtccggatttcagcagcaaaattaagctgtacacc
ggggaaatcccgctgttcagccactatcaaatcgaatcgcagattgaatccgctttccag
cgtgaagtgcgtctgccttccggcggttctatcgttatcgacagcaccgaagcgctgacc
gctatcgatatcaactccgcacgcgccacccgcggcggcgacatcgaagaaacggcgttt
aacaccaacctggaagcggcagatgaaatcgctcgtcagctgcgtctgcgcgaccttggc
ggcctgatcgttatcgacttcatcgatatgaccccggttcgccatcagcgtgcggtggaa
aaccgcctgcgcgaagccgtccgtcaggaccgagcgcggatccagatcagccatatttca
cgctttggactgctggagatgtcgcgccagcgcctgagcccgtcgctcggcgagtccagc
catcatgtctgcccgcgctgtagcggaacgggtaccgtgcgcgataacgaatcgctgtcg
ctttccattctgcgtttgattgaagaagaagcgctgaaagagaacaccaaagaagttcac
gctatcgtgccggtgccgattgcctcttacctgctgaacgaaaaacgtgctgcggtaagc
gcgattgaaacccgtcagaccgatgtgcgcgtcattatcgtgccaaacgaccagatggaa
acgccgcactactccgttctgcgcgtgcgtaaaggcgaagaaacctccacgctgagctat
ctgctgccgaaactgcacgaagaagagatggccatgccttctgatgaagagccggccgag
cgtaagcttccggaacaaccggcgctggccgcttttgtcatgcctgaagcccctccggct
ccggcacaggaagagccgacgagggcaacagctaccgttacgcctgccgcatccgcaccg
aaggccgcagcgccggcccagcctggtctgattgcccgcttcttcagcgccctgaaaaat
atgttctctggcgcggaagagactaaaccggcagaagttcaggttgagaaaaaagcggaa
gagaaatccgaacgtcagcaggagcgtcgtaaaccgcgttctaacaaccgccgcgatcgc
aatgaccgtcgtgacaaccgggataatcgcgatagtcgtgataaccgtgatagtcgtgcc
gagaatagcgaaggccgggagtctcgcgaagaaaaccgccgtaaccgtcgtgagaagcag
cagaacgccgagccgcgcgaaattcgccagaccacggtagaagatagcgaaaaaggcaaa
gctcgcgacgagcagcagccgcgccgcgaacgtaatcgtcgtcgtaacgatgataaacgt
caggttccgcaggaagccaaaacgcaaacccgtgaagagccaatcgtacaggatagcgag
caggaagaacgcgtccagactatgccgcgtcgtaaaccgcgtcagctggcgcagaaggtt
cgtttcgaatcggctgccgctgagcaggttgtcgagccggtagccgcagcgcaggtaacc
gaagcgcctgtcgtccagccggaaaccgttgctccacgtactgaactggcaaaagtcgat
ctgccggcggtcgttgagacagctgcggaacatgacgacaacggtgaagcacgcgaatct
aacggcatgccgcgccgttcgcgtcgctcgcctcgtcacctgcgcgtaagcggccagcgc
cgtcgtcgctaccgtgatgagcgttacccgacgcaatccccgatgccgctgaccgttgcc
tgcgcatcgccggaaatggcgtctggtaaagtgtggatccgctatccggtggttcgtccg
caggaccagcagcaggaagacgctccggttcaggagttctccgtcgctgcggctgagccg
atcattacgccagcggctgccgccgagccggttgtttctgaagtcattgcgccagcagca
gccgaagatagcgcagccatctccgaacctgtggcggtgattaacgaaccggaagtcccg
gtcgttgaaactacccatccggaagctatcgccaccccggttgatgaacagccgcagctg
attgcaaaagccgatgaagccgtagtcgaagacgttgtcgcagaagccgtcgaagttgat
gcgaaagacgccgtcgagccggaagcaacggcccctgtgtctgaacccgttgtagccgaa
cctgctgcagccgaagaagcgcctgaggttgttgaagaagcgcctgtcgtttccgcgcca
gcgccagtagcggagccggtggttgaggctaagccagctctcgaagccgcgccggtagtt
aaggtcgccaatcgtcacgcgacggcgccgatgacgcgtgcgcctgcaccagactacgtg
cccgaagcgccgcgtcaaagcgattgggttcgcccgaactttgattttgacggtaaaggc
tctgctggcggccatagcgccacgcataaagccactgccggacctacccgtccgcagtcc
gtggagtaa
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