KEGG   Klebsiella sp. M5al: BWI76_11395
Entry
BWI76_11395       CDS       T09148                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
klm  Klebsiella sp. M5al
Pathway
klm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:klm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BWI76_11395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:klm03021]
    BWI76_11395
Transcription machinery [BR:klm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BWI76_11395
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF PhyR_sigma-like HTH_23 HTH_11 HTH_Tnp_4 HTH_24 HTH_28 HTH_36 TnsD HTH_Mga Rv2175c_wHTH HTH_7 Fe_dep_repress
Other DBs
NCBI-ProteinID: ARI08102
LinkDB
Position
complement(2402426..2402947)
AA seq 173 aa
MSPSSAIASPLTLASLYSDHHGWLKKWLTHKLKSVYDADDVAQDTFVRIMAGGSLSTIRD
PKSFLCTIANRVMIDLFRRNALERAWLEMLSQLPEELSPSPEQRQSQLELLQQIDAMLDG
LNVKAREAFLLSQLEGLTYADIASRLAVSVSSVKKYIAKATEHCLLFRLENGL
NT seq 522 nt   +upstreamnt  +downstreamnt
atgtccccttcttccgccatcgcctctccgctgacgcttgcctcgctgtatagcgaccat
cacggctggctgaaaaaatggcttacccataagctgaaatccgtttatgacgccgacgac
gtagcgcaggatacctttgtccgaattatggccggcgggtcgctgtcgaccattcgcgac
ccaaaatcttttctttgcacaattgccaatcgggtgatgatcgatctgttccgccgaaat
gcgctggagcgcgcatggctcgagatgctctctcagctaccggaagaactctccccttcc
ccggaacagcgacaaagccagctagaattgttacagcagattgacgccatgctggacggg
cttaacgtcaaagcccgggaggcctttttactctcgcagcttgaaggattgacctacgcc
gacatcgccagccgcctggcggtttccgtcagttcggttaagaaatatatcgcgaaagcc
accgagcactgcctgctgtttcgtctggagaatggcctgtga

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