Pantoea rwandensis: LH22_00790
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Entry
LH22_00790 CDS
T03331
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
kln
Pantoea rwandensis
Pathway
kln02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH22_00790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kln02000
]
LH22_00790
Transporters [BR:
kln02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LH22_00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
AAA_16
AAA_23
RsgA_GTPase
AAA_22
AAA_29
nSTAND1
ORC-CDC6-like
ABC_ATPase
AAA
AAA_25
nSTAND3
AAA_5
NB-ARC
nSTAND_NTPase5
NACHT
Mg_chelatase
Rad17
ATPase_2
AAA_27
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AIR84073
UniProt:
A0ABM5RDQ9
LinkDB
All DBs
Position
173919..174911
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AA seq
330 aa
AA seq
DB search
MSYLNVTQLNKSYGPTSIFENIDFSADEGEFVTLLGPSGCGKSTLLRCIAGLTDVDSGKI
LLQGQDIVPLPPQKRTIGMVFQSYALFPNMTVEKNVAFGLKMQKLPGGDIQKRVMEALAL
VELTDFARRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRRHLREQIRNIQ
QELKLTTIFVTHDQEEALTLSDRIVLMNRGKIVQNGNAEALYTQPADLFAAGFIGNYNLL
SAEQATQLTGQTFTGQVAIRPESIRLSAPQDGIPGTILSHSLLGNVIRYRVVANSVELSV
DVLNRSVADLHPAGMQIGLQLEMSTLRQVA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagttatctgaatgtcacccagctgaacaaaagctacggccccaccagcatctttgaa
aatatcgatttcagcgccgatgaaggcgagtttgtcaccctgctcggcccgagcggttgc
ggcaaatcgacgctgctgcgctgcatcgccggtttgaccgatgtcgatagcggcaaaatt
ctgctgcagggtcaggatatcgtgccgctgccaccgcagaaacgtactatcggcatggtg
tttcagagctacgcactgttccccaacatgacggtggagaagaacgtggcgtttggcctg
aaaatgcagaaactgccaggcggcgatattcagaaacgcgttatggaagcgctggcactg
gtcgaactgaccgattttgcccgccgttatccgcaccagctttctggcggacaatgccag
cgtgttgccttagcgcgctccctggtcacgcgtcctcgtttgctgttgctggatgagccg
ctctccgcactggatgcgcgtatccgccgccatctgcgcgaacagatccgcaacattcag
caggagttaaagctcactacgattttcgttacccacgatcaggaagaggcgctgacgctg
tcggatcgcatcgtgctgatgaaccgtggcaagatcgtgcaaaacggcaacgctgaagcc
ctctacacgcaaccagccgacctatttgccgccgggtttatcggcaactacaacctgctg
agtgcggaacaggcaacgcagctcaccggccagacattcacgggtcaggtagcgattcga
cctgagtcaatccgcttgagtgcaccgcaggatggcattccgggcactattctcagtcac
agcctgctgggtaatgtcattcgctatcgcgtagtggcgaatagcgtggagttatccgtc
gatgtgctgaaccgtagcgtggcggatttgcaccctgctggcatgcaaattggtctacag
ttagagatgtcgacgttgcgccaggttgcttaa
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