Pantoea rwandensis: LH22_02700
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Entry
LH22_02700 CDS
T03331
Symbol
treR
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kln03000
]
LH22_02700 (treR)
Transcription factors [BR:
kln03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LH22_02700 (treR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
HTH_23
HTH_3
HTH_IclR
MarR_2
HTH_7
HTH_Tnp_ISL3
SpoIIID
HTH_31
Sigma54_DBD
HTH_28
MarR
HTH_36
HTH_17
HTH_38
HTH_AraC
HTH_26
Brix
CENP-B_N
HTH_Crp_2
HHH
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AIR84420
LinkDB
All DBs
Position
complement(603068..604024)
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AA seq
318 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVINNEEGVSESTRLKVLKVVQDQNFSPSKSARSMRGG
SDKIVAIIVSRLDSPSENQSVRAMLPMLYQQGYDPIVLESQFCTDRVAEHLQVLERRNID
GLILFGFSGLDISMFTQWHHKMVMVARSMPGISSVEYDNAGAVELLMEQLIKRKIKNISY
IGVEAEDATTGQQRSEAYINQCREHGLDVSIALGNLSHQSGFDLTSQVLKPDTQAVICAT
DTIALGVHKYLQLQGISAIQVCCVGSHPLLNFLFPNTLSVQPGYRDSGEVAVKQLISQLL
GNSPPLQHVISATLGLPE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccgtctcaccattaaagatatcgcccgtcttagcggagtaggtaaatctacc
gtttcgcgcgtaatcaataatgaagagggtgtcagtgagtcgacccgcctaaaagttctt
aaagtcgttcaggatcagaatttcagcccttcaaaatcggcccgatccatgcggggaggg
agcgataagatcgtcgcaataattgtttcacgattggactccccctcagaaaaccaatct
gtacgcgccatgcttcctatgctttatcagcaaggctatgacccgattgtgcttgagagc
caattctgtactgaccgggttgctgaacatctgcaggtactggagaggcgcaacattgac
ggtctgattctcttcggcttttccggattagatatcagcatgtttacgcagtggcaccac
aaaatggtcatggttgcacgttcgatgccgggaatatcctccgtagaatatgacaatgct
ggcgctgtcgagctgttaatggaacagctcattaaaagaaaaattaagaatatcagctat
attggagttgaagcagaggacgcaaccaccggtcagcaacgttccgaagcctatataaac
cagtgccgtgaacacggtttagacgtgtcgatagccttaggcaatctgagccatcaaagc
ggatttgatttaacctcccaggtgctaaaaccggacactcaagcggtgatttgtgctaca
gacaccattgcattaggcgtgcataagtacctacaattacagggtatcagcgctattcaa
gtgtgctgcgttggaagtcatcctctgttaaattttctttttccaaacaccctatctgta
caaccgggttatcgagatagcggagaagtggcggttaaacaactcatctctcagcttttg
ggcaactcccccccccttcagcatgtgatttctgcgacgctaggtttacctgagtaa
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