Pantoea rwandensis: LH22_02760
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Entry
LH22_02760 CDS
T03331
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kln
Pantoea rwandensis
Pathway
kln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH22_02760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kln03400
]
LH22_02760
Enzymes [BR:
kln01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LH22_02760
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LH22_02760
DNA repair and recombination proteins [BR:
kln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH22_02760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AIR84432
LinkDB
All DBs
Position
612540..613349
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHMVGATILHAVVRNSRLRWPVSHEIHALSDQPVLSVQRRAKYLL
LELPHGWIIIHLGMSGSLRVLPGEQPAAKHDHVDLVMSNGKVLRYTDPRRFGAWLWTPDL
EGSSVLAHLGPEPLSSEFDGAYLFEKSRGKRTVIKQWLMDNKVVVGVGNIYASESLFTAG
ILPDRPAMSLSRDEAELMVATIKAVLLRSIEQGGTTLRDFLQTDGKPGYFAQELQVYGRT
GEPCRACGTPIVSGKHGQRSTFWCPRCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggtagaaaccagccgacgtggtattgagccacatatggtaggc
gcgaccattttgcatgcggttgtgcgtaattcacgcctgcgctggccggtctcgcacgaa
atccatgcgctaagtgaccagccggtgctgagcgtgcaacggcgcgcaaaatacctgctg
ctggaactgccacacggctggattatcattcacctcggcatgtctggcagccttcgagtc
cttcctggtgagcaacccgccgcaaaacacgatcacgtcgatttggtgatgagcaacggc
aaggtgctacgttataccgatccacgccgttttggtgcgtggttgtggactccagatctg
gaaggcagcagtgtactggcacatctcggtcctgagccgctcagcagcgaattcgatggt
gcttatctgtttgagaagtcgcgtggaaagcgcacggtcattaaacagtggctgatggat
aacaaagtggtggtcggcgtgggcaacatttacgccagcgaatcactgtttaccgccggg
atcttacccgatcgaccagcgatgagtttgagtcgtgatgaagcggagttgatggtggcg
acaatcaaggccgtattgctgcgttcgattgagcagggcggtaccacgctacgtgatttc
ctgcaaacggatggaaagcctggctactttgctcaggaattgcaggtctatggccgaacg
ggcgaaccctgccgagcctgcggtacgccaatcgtcagcggcaaacacggccagcgcagc
accttctggtgccctcgctgccagcattaa
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