Pantoea rwandensis: LH22_02820
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Entry
LH22_02820 CDS
T03331
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
kln
Pantoea rwandensis
Pathway
kln00541
Biosynthesis of various nucleotide sugars
kln01100
Metabolic pathways
kln01250
Biosynthesis of nucleotide sugars
Module
kln_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LH22_02820 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kln01005
]
LH22_02820 (rfaD)
Enzymes [BR:
kln01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LH22_02820 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
kln01005
]
Core region
LH22_02820 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
AIR84444
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Position
625162..626094
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AA seq
310 aa
AA seq
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MIIVTGGAGMIGSNIVKALNDRGLTDILVVDNLKDGTKFVNLADLDIADYMDKEEFLSYI
MSGEDLGPIEAVFHEGACSATTEWDGKYMMDNNYQYSKDLLHFCLEREIPFLYASSAATY
GGRNENFIEERQYEQPLNVYGYSKMLFDHYVRQIMPEADSPVCGFRYFNVYGPREGHKGG
MASVAFHLNTQISNGENPKLFEGSDDFRRDFIHVDDVVAVNLWCWENGVSGIYNCGTGRA
ESFQEVADAVLKFHQQGQIEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAQGVG
EYMTWLNRKA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaaccggtggcgctggcatgattggcagcaacattgttaaagcgctgaac
gatcgcggtcttaccgatattctggtggtggataatctgaaagatggcaccaaattcgtg
aatctcgcagatctggatatcgcagactacatggacaaagaagagttcctctcttacatc
atgtccggcgaagatctgggtccaatcgaagcggtattccatgaaggtgcctgctcggcg
accacagagtgggatggcaagtacatgatggataacaactatcagtactcgaaagacttg
ctgcatttctgcctggaacgcgaaattcctttcctttacgcctcttcagcggccacttac
ggtggccgcaatgaaaacttcattgaagagcgccagtacgagcagccgctgaacgtctat
ggctactcgaaaatgctcttcgaccactacgtgcgtcagattatgccggaagccgattct
ccagtgtgtgggttccgctatttcaacgtttacggcccacgcgaaggtcacaaaggcggt
atggcgagtgtggctttccacctcaatactcagatcagcaatggtgaaaatccaaagctg
tttgaaggtagcgacgatttccgccgcgatttcatccatgttgacgatgttgttgcggta
aacctgtggtgctgggaaaacggtgtatctggcatctacaactgtggtacaggccgtgcg
gagtccttccaggaagtcgccgatgcagtgctgaagttccatcagcaaggccagatcgaa
tacatcccgttccctgagaaactgaaaggccgctatcaggcattcactcaggcggacctg
accaatctgcgcgcagcgggttatgacaagccattcaaaaccgttgctcagggtgtgggt
gaatacatgacctggctcaatcgtaaagcataa
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