Pantoea rwandensis: LH22_04525
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Entry
LH22_04525 CDS
T03331
Name
(GenBank) mechanosensitive channel protein
KO
K22051
miniconductance mechanosensitive channel
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kln02000
]
LH22_04525
Transporters [BR:
kln02000
]
Other transporters
Pores ion channels [TC:
1
]
LH22_04525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AIR84762
UniProt:
A0ABM5RFL3
LinkDB
All DBs
Position
complement(964726..968061)
Genome browser
AA seq
1111 aa
AA seq
DB search
MRVFLSLLLSLVLSSSVLAATVPPASQLKQELDAAKSAKASPAQAEQVQAIEAAINFLSE
RDESLERAKQYQQVIDDFPRLARELRQQIATLTDSSKTVRTNMSSAELDQEILQISSQLL
EEGRQAQQEQDRAREISDSLSQLPQQQTDARRAMTESDRRAQGFSAAATPLAQAQIYARL
AENAANKARVDELELAQLSANNRQELARMRAEVHQRKVTQLDNYLQSLRNQLNNQRQREA
ELALERTEQLAENSGDLPASISDQFRVNRELSADLNAQAQRMDLVASQQRLATNQTLQVR
QALSTLREQSQWLGASNLLGEALRAQVARLPDMPKSQQIDSEMGQLRVQRLHYEDLLERQ
KDLRKEKQDDGTPFTSEQTRILDAQLKTQRELLNSLISGCDTLILEITKLKVSNTQLQDA
LGEVKEATHRYLFWTADVSAIDLKYPIDVARDLTRLLSLDTLGQLGKALAMMFTSKETVM
PIICAVLLVGFSISSRRHYNAFMARSASKVGKVTQDRFSLTLRTVFWSILVAVPLPVLWA
ALGFGLQHAWPYPFAVAIGDGITATLPLLWAFMISAAFARHDGLFVVHFRWPQARVARAM
RYYSLTVGLIVPLIMLLIAFANLDDPQFSGTLGRLCFILICGALSIVTVSLKRAGIPLYL
DKEGNGDNFVNRILWNLMIAIPLVAALASCIGYLATAQALLARLETSVGIWFFLLVIYHI
IRRWMLIQRRRIAFDRARQRRADMLANRARSEEEKDQQTPANADTIEIEEPSLDLDEISA
QSLRLVRSILTLIALVSVIVLWSEIHSAFSFLDNIPLWDASTTVQGVESVQPITLGAVLI
AILVFIITTQLVRNMPALLELALLQHISLTPGTGYAITTLTKYVLMLIGGLVGFSIIGVE
WAKLQWLVAALGLGLGFGMQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSITRINTRA
TTITDWDRKEIIVPNKAFITEQFVNWSLSDSVTRVVLTIPAPAHVNSDEVTNILKQAAER
CTYVLDMPAPDVFLVDLQQGIQLFELRVHAAEMGHRMPLRHELHQLILRGFEEHGIEMPF
PPFQVRMETLGRKTPASNGSPSSQTFKSGGL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtttttctctctctgctgctgagcctggtgctcagcagttctgtattggcagcc
accgttcctcctgcgagtcagctgaagcaggaactggatgcggccaaatccgccaaagcc
tctcccgctcaagccgagcaagttcaggcgattgaagcggcgatcaatttcctctctgag
cgtgatgaatcgcttgagcgtgccaaacagtatcagcaggtgattgatgatttcccacgg
ctggcacgtgaactgcgtcagcagattgccacgctgaccgacagcagtaaaacggtgcgc
accaacatgagcagcgccgagctggatcaggaaatcctgcaaatcagcagccagctgctg
gaagaaggccgtcaggcgcagcaagagcaggaccgcgcacgtgagatcagcgattcactt
tcacagttaccgcagcagcagactgacgcgcgccgggcgatgaccgaaagcgatcgccgt
gctcagggcttttctgcggccgctacgccgctggctcaggcgcagatatatgcccgactg
gccgagaatgccgccaataaagcgcgcgtggatgagttagaactggcacagctctccgcc
aataatcgccaggagctggcgcgtatgcgggcggaggtgcatcagcgcaaagtgacgcag
ctggataactatctgcagtcgctgcgcaatcaactgaataaccagcgtcagcgagaagcg
gaactggcgctcgaacgcactgaacagctggcggaaaacagtggcgatttaccggcttcg
atcagcgatcaattccgcgtcaaccgtgagctatcagccgacctgaatgcgcaggcccaa
cgtatggatttggtcgcttcgcagcaacgtctggccaccaaccaaacgctacaggtgcgc
caggctctcagcacgctgcgcgaacaatcacaatggctgggcgcctcgaatctgctgggt
gaagccttgcgtgcgcaagtcgccagattgccggatatgccgaagtcgcagcagatcgac
agcgagatgggccagctgcgtgtacaacgactgcattatgaagatttgctggagcggcaa
aaggatctgcgcaaagagaagcaggatgacggcacgccgttcaccagcgagcaaacccgt
attcttgatgcccagttgaaaacccagcgcgagctgctcaattcactgatctccggctgc
gatacactgattctggaaatcaccaagctgaaggtgtcgaacacgcagttgcaggacgcc
ctgggtgaagtgaaggaagccacccaccgttatctgttctggacggcggatgtcagcgcc
atcgacctgaagtatccgattgacgtggcgcgtgacttaacccgcctgctgtcgctggat
accttagggcaactcggtaaagcgctggcgatgatgtttaccagcaaagaaaccgtgatg
ccaatcatctgcgcagtgctgttggtgggcttcagcatcagctcgcgccgtcattacaat
gcctttatggcgcgttccgccagcaaagtgggcaaagtgacccaggaccgctttagcctg
acattgcgcaccgtgttctggtcgattctggtcgccgtgccgctgccggtattgtgggcc
gcgctgggctttggtttgcagcacgcctggccttatccgtttgccgttgcgattggagat
ggcatcaccgccacgctgccgctgctgtgggcctttatgatcagtgctgcttttgcgcgt
catgatgggctatttgtggtgcacttccgctggccgcaggcgcgggtagcgcgtgctatg
cgttactactctctgacggttggcctgattgtgccgctgatcatgctgctgattgccttt
gccaatctggacgatccgcagttctccggcacgctcggtcgcctgtgcttcattttgatt
tgcggtgcgttaagtattgtcaccgtcagcctcaaacgtgcaggcattccgctgtatctg
gataaagagggcaacggcgacaacttcgttaaccgcattctgtggaacctgatgattgcc
atcccgctggtggcggcgttggcttcctgcatcggctatctggcaacggcgcaggccctg
ctggcacgcctggaaacctcggtaggcatttggttcttcctgctggtgatttaccacatt
attcgccgctggatgctgatccaacgtcgccgcatcgcctttgatcgcgcccgccaacgc
cgtgccgatatgctggcgaaccgtgcgcgcagcgaagaagagaaagatcaacaaacgccc
gccaacgccgataccatcgaaattgaagagccgagcctggatttagatgagatcagcgcg
cagtcattgcgtttggtgcgctccattctgacgttgattgcgctggtatcggtgattgtg
ctgtggtcggaaattcactcggcctttagcttcctcgataatatcccgctatgggatgcc
agcaccacggtgcagggcgtggagagcgtgcagccgataacgctgggtgcggtgctgatt
gccatcctggtgttcattattaccacccagctggtgcgcaacatgcctgccctgctggaa
ttggcactgctgcaacacatcagcctgacgcccggcaccggttacgctattaccaccctg
accaaatacgtactgatgttgattggcgggttagtcggcttctcgattattggtgttgag
tgggcaaaactgcagtggctggtggcggcattaggtctgggactgggctttggtatgcag
gagatcttcgccaactttatttctggtctgattatcctgttcgaaaagccaattcgtatc
ggcgataccgttaccattcgcgatctgaccggcagcattacccgcatcaatacccgcgct
acgacgattaccgattgggaccgtaaagagatcattgtgccgaacaaggcctttatcact
gagcagttcgttaactggtcgttgtcggattctgtcacgcgtgtggtgctgaccattccg
gctccggctcatgttaacagtgatgaagtcaccaacattctcaagcaggcggccgagcgc
tgtacctatgtgctggatatgcccgcgccggatgtgttcctggtggatttacagcaaggc
attcagctgtttgaattgcgtgtgcacgcggctgagatgggccaccgcatgccgctgcgt
catgagttgcatcagttgattctgcgcggctttgaagagcacggcattgagatgccgttc
ccaccattccaggtgcgtatggaaacgctggggcgtaaaacaccggccagcaatggctca
ccgtccagccagacctttaaatctggcggcttataa
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