Pantoea rwandensis: LH22_04540
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Entry
LH22_04540 CDS
T03331
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
kln
Pantoea rwandensis
Pathway
kln03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LH22_04540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kln03019
]
LH22_04540
03009 Ribosome biogenesis [BR:
kln03009
]
LH22_04540
Messenger RNA biogenesis [BR:
kln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LH22_04540
Ribosome biogenesis [BR:
kln03009
]
Eukaryotic type
Pre-60S particles
RNases
LH22_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AIR84765
UniProt:
A0ABM5RFH6
LinkDB
All DBs
Position
970216..970764
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AA seq
182 aa
AA seq
DB search
MTAGNENNLIWIDLEMTGLDPEQDRIIEIATIVTDANLNILAEGPVFAVHQSDEQLALMD
EWNVRTHTNSGLVERVKASQYDDRAAERATIEFLKQWVPANTSPICGNSIGQDRRFLFKY
MPELEAYFHYRYLDVSTLKELARRWKPDILPGFKKAGSHQALDDIRESVAELAYYREHFL
QL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgacagctggaaatgaaaataatctgatttggatcgacctggaaatgaccggattggat
ccggagcaggatcgcattattgagatcgccacgatcgtcaccgatgccaacctgaacatc
ctggcagaaggcccggtgtttgcggtgcatcagtctgatgagcaattggcattgatggat
gagtggaatgtgcgtacgcacaccaacagtggcctggtcgaacgtgtgaaagccagccaa
tacgacgaccgtgctgcagagcgggcgaccatcgaatttctcaagcagtgggttccggcc
aacacttctccgatttgcggcaacagcatcggccaggatcgtcgcttcctgttcaaatac
atgccggagctggaagcctacttccattaccgttatctggatgtcagcacgctaaaagaa
ctggcgcgtcgctggaaaccggatatcctgccaggcttcaaaaaagccggcagccatcag
gcgctggacgatattcgcgagtccgttgctgagttggcgtattaccgcgagcacttcttg
cagctttaa
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