Pantoea rwandensis: LH22_05300
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Entry
LH22_05300 CDS
T03331
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
kln
Pantoea rwandensis
Pathway
kln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH22_05300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kln03400
]
LH22_05300
Enzymes [BR:
kln01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
LH22_05300
DNA repair and recombination proteins [BR:
kln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH22_05300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIR84909
LinkDB
All DBs
Position
1108780..1109295
Genome browser
AA seq
171 aa
AA seq
DB search
MSEHDIQDIIAPDLQVLFCGINPGKSSAHTGFHFAHPGNRFWKVIHQAGFTRELLKPEQE
QRLLETGCGITMLVERPTIQANELAGDELRDGGARLQEKILRYQPRALAVLGKDAFQKAF
RQRKVEWGEQPQTLGETRLWVLPNPSGLNRATIEEMAAAYRQLHDWLQNNA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcacgatattcaggacattattgcgccggatttgcaggtgctgttttgtggc
atcaatccaggcaaatcatcggcgcacaccggcttccactttgctcatccgggtaatcgc
ttctggaaggttatccatcaggccggttttacccgcgagttgctgaaaccagaacaggag
cagcggctgctggaaaccggttgtggcatcactatgctggttgagcgtcccaccattcag
gccaatgagttggcgggtgatgagctgcgcgatggcggggcgcgtttgcaggagaagatc
ttacgctatcagccgcgcgcgctggcggtgctgggtaaagatgcgttccagaaagcgttc
cgacagcgcaaagtggagtggggcgagcagccgcaaaccttgggcgaaacgcgtttgtgg
gtgctgcccaatcccagcggtttaaaccgcgcgacgatagaggagatggcggcagcttat
cgccaacttcatgattggttacagaataacgcgtga
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