Pantoea rwandensis: LH22_06600
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Entry
LH22_06600 CDS
T03331
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
kln
Pantoea rwandensis
Pathway
kln00300
Lysine biosynthesis
kln00470
D-Amino acid metabolism
kln01100
Metabolic pathways
kln01110
Biosynthesis of secondary metabolites
kln01120
Microbial metabolism in diverse environments
kln01230
Biosynthesis of amino acids
Module
kln_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LH22_06600
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LH22_06600
Enzymes [BR:
kln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LH22_06600
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AIR85154
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Position
1410204..1411457
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AA seq
417 aa
AA seq
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MPRPLNNTETALTADNLLPLAQRYAGPFWAYDAAIIQQRIVQLSAFDVVRFAQKACSNIH
ILRLMRAAGVKVDSVSLGEIERALAAGFQPGGEDIVFTADVFDQPTLARIAELKVPVNAG
SVDMLHQLGAVSPGHKVWLRINPGFGHGHSQKTNTGGENSKHGIWHSDLPLALAAIQQHG
LKLVGLHMHIGSGVDYGHLQQVCDAMVDQVIEFGQDLEAISAGGGLSIPYRFGEEAIDTQ
HYFGLWSGARDRIAAHLGHPVKLEIEPGRFLVAESGVLVSQVRAVKEMGSRHFVLVDAGF
SDLMRPSMYGSYHHISVLPADGRALSDATVESVVAGPLCESGDVFTQLEGGKVETRALPA
TQVGDYLVFHDTGAYGASMSSNYNSRPLIPEVLFENGSPREIRRAQTIQELLALELM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtccactgaacaacaccgaaacggcactgactgccgacaatttattgccgctg
gcgcagcgctatgctgggccattctgggcttacgatgccgcgattattcagcagcgtatt
gtgcagttgagcgcttttgacgtggtacgtttcgcgcaaaaagcctgctcaaacattcac
attctgcgtctgatgcgtgccgctggcgtaaaagtggattccgtttcactgggtgaaatt
gaacgtgccctggccgccggtttccaaccgggtggcgaagatatcgtcttcacggctgac
gtttttgatcagccaacgctggcgcgtatcgcggaattgaaagtgccggtcaacgccggt
tccgtagacatgttgcatcagcttggggctgtatcaccaggccataaagtctggctgcgc
atcaacccgggatttggtcatggtcacagccagaaaaccaacactggcggcgagaacagc
aagcacggcatctggcacagtgatctgccgctggcgctggcggcgattcagcagcacggc
ctgaaactggtgggcctgcatatgcacatcggttccggtgtcgattatggccacctgcag
caggtgtgtgacgcgatggtcgatcaggtcatcgaatttggtcaggatctggaagccatt
tcagcgggtggtggtttgtcgattccataccgtttcggcgaagaagccattgatacccag
cactatttcggcttgtggagtggtgcgcgtgaccgcatagcggcgcatctcggtcatccg
gtgaaactggaaattgaaccgggccgtttcctggtggcagagtctggcgtactggtgtct
caggtgcgtgcggttaaggagatgggcagccgtcactttgtgctggtggatgccggtttc
agcgatctgatgcgcccatccatgtacggcagctatcaccatatttccgtgctgccagcc
gatggtcgcgcgctgagtgacgcaaccgttgagagcgtggtggccggtccgctgtgcgag
tcgggcgatgtgttcacccaactggaaggcggtaaagtcgaaacccgtgcgttgccagcc
acgcaggtcggcgattatctggtgttccacgataccggcgcgtacggcgcatcgatgtcg
tccaactacaacagccgtccgctgattccggaagtgctgttcgagaacggcagcccgcgt
gagattcgtcgtgcgcagaccattcaggagctgttggcgctggagctgatgtga
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