Pantoea rwandensis: LH22_06770
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Entry
LH22_06770 CDS
T03331
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kln
Pantoea rwandensis
Pathway
kln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LH22_06770 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kln03400
]
LH22_06770 (recD)
Enzymes [BR:
kln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LH22_06770 (recD)
DNA repair and recombination proteins [BR:
kln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH22_06770 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
SH3_13
AAA_22
UvrD-helicase
DEAD
SLFN-g3_helicase
nSTAND3
AAA_16
AAA_24
T2SSE
PhoH
UvrD_C
AAA_28
TrwB_AAD_bind
ABC_tran
FtsK_SpoIIIE
CbiA
DO-GTPase1
Zeta_toxin
AAA_33
SRP54
ResIII
AAA_7
AAA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AIR85184
LinkDB
All DBs
Position
1457443..1459293
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AA seq
616 aa
AA seq
DB search
MNGIAALLQQAVELRLLRSLDVQFALLLADDTQPARLLAAACLSAEAGEGHVCLPLSQLS
REGLFKGRHPELAQAIWLAAGEPQDWTQILAGWPALSNSKNEQAAPIVLTEGRLYLHRLW
HHEGQVARFFQAQSAPQAFPDGEVRTVLDNLFGTEPDDWQKIAAAVALTQKTAVISGGPG
TGKTTTVAKLLASLIRLSHGALRIQLAAPTGKAAARLTESLGKALQKLPVSDIERQRFPA
EATTLHRLLGAQPETQRLRYHAGNLLHLDVLVVDEASMVDLGMMANLIAALPPQARVIFL
GDRDQLASVEAGAVLGDICRCAEAGYSVARAAQLSALTGCQVEGHDDDSAPAVRDAICLL
RKSYRFDANSGIGKLAAAVNAGEPKAVEAAFNAGFSDISRQPLNDGEAYQAMLNDIAEGY
RPFLRLVSQRAQPAEILHAFGRYQLLCALREGPFGVQGLNQRIEQKLMQLQLIRRPQGGS
RWYQGRPVMVTRNDSALGLFNGDIGMTLLDDEGLLKVFFPLPDGSIKAVQPSRLPAHDTA
WSMTVHKSQGSEFDHTALVMPAQFLPVLTRELIYTAITRARKQLTLYSDESVFRRAVQLR
TQRRSGLLDRLSGESF
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcattgcagcgctattgcaacaggcggttgagctacgtttactgcgttcactg
gatgttcagttcgcactgttactggcggatgacacgcagccagcacgcctccttgcggct
gcctgtctcagtgcggaagcgggtgaggggcacgtctgtttaccgctgtcacagttgagc
cgtgaagggttattcaagggccgtcaccctgaactggcgcaggccatctggctggcggcg
ggcgaaccgcaggactggacgcaaattctggctggctggcctgctctgagcaacagcaaa
aacgagcaggcagcaccgattgtactaaccgaaggccgtctttatctgcatcgtctctgg
caccacgaagggcaggtggcgcgtttctttcaggcgcagtctgctccgcaggcatttcct
gatggagaggtgcgtactgtactggataacctgtttggtactgagccagatgactggcaa
aaaatcgcggcggcggtggcgctaacgcagaaaacagcggtgatctcgggcggccccggc
accgggaaaaccaccaccgtggcaaaactgctggcgtccttgattcgcctgagccacggc
gcgctgcgcattcagctggccgccccgaccggaaaagcggcggcgcgtttaaccgaatcg
ctcggtaaagcgttgcaaaaactgccggtcagcgacattgagcgccaacgcttccctgcg
gaagctaccacgctgcaccgtttgctcggtgcccagcccgaaacccagcgcttgcgctat
cacgccggtaacctgctgcatctggatgtgctggtggtggatgaagcctcaatggttgat
ttgggcatgatggccaatctcatcgccgcactgccacctcaggcgcgcgtgatttttctt
ggtgaccgcgaccagttggcgtcagtagaagccggtgcggtactgggcgatatttgccgc
tgcgcggaagcgggatacagcgtcgcgcgtgccgcccagctgagtgcgttaaccggttgc
caggttgaaggccacgatgatgacagcgcgccagccgtgcgcgacgccatctgcttatta
cgcaagagctatcgcttcgatgctaactcgggcatcggcaagcttgcggctgcggtcaat
gcaggcgagccaaaggcggttgaggccgcatttaacgcgggcttcagcgatatatcacgc
cagccactcaatgatggcgaggcctatcaggcaatgctgaatgatatcgcggaaggctac
cgtccgttcctgcggctggtgagccagcgagcacagcccgcagagattctgcacgcattt
gggcgatatcaactgctgtgcgcactgcgagaagggccgtttggcgtgcagggattgaat
cagcgtattgagcaaaaactgatgcagctgcagctgattcgtcgtccacagggtggcagc
cgctggtatcaggggcgcccggtgatggtgacacgcaatgacagtgcgcttgggctgttt
aacggcgatatcgggatgactttgttagatgacgaagggctactgaaggttttcttcccg
ttacccgatggcagcattaaagcggtgcagccgagccggttaccggcgcatgatacggcc
tggtcgatgacggtgcataaatcgcaggggtcggagttcgaccatacagcactggtgatg
ccggcacagtttttaccggtgctcactcgcgaactgatctacaccgccattactcgtgcg
cgcaaacagttaacgctctacagcgatgaaagcgtgtttcgccgtgcggtgcagttacgc
acccagcgtcgaagcggattgctggatcgattgagcggggagtcattctga
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