Pantoea rwandensis: LH22_07020
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Entry
LH22_07020 CDS
T03331
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kln03016
]
LH22_07020 (truD)
Enzymes [BR:
kln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LH22_07020 (truD)
Transfer RNA biogenesis [BR:
kln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LH22_07020 (truD)
Prokaryotic type
LH22_07020 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
AIR85231
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All DBs
Position
1511094..1512137
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AA seq
347 aa
AA seq
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MSELLYLHGVPSATGVIKANPEDFLVIEDLGYPYDGEGEQVLVRIRKIGCNTRFVAEAIA
KFLGVHQRDMSYAGMKDRHAVTEQTLCFRVPGNAMPNLAGFQLEGVEILQVIRHKRKLRT
GALAGNAFRLVVRQISDRAEVEARLQHIQQSGVPNYFGEQRFGRGGNNLTQAKLWAEDKF
RPRDRSMKGILLSAARSQLFNQVTSARLQRDGVLDQVQEGDALQLAGRGSWFVAQAEELA
ELQQRVNHHELRITAPLAGRGELGPQGDALAFEQANLAPAADLLALLERERVDAARRAML
VVPKDLRWNWWDDVTLEMQFWLPAGSFATSVVRELLSNGAAAPISEE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgctttacctgcacggcgttccaagcgccaccggcgtgatcaaggccaat
cccgaagatttcttggtgattgaagacctcggctatccctatgatggcgaaggcgagcag
gtgctagtgcgcatccgcaagatcggttgcaatacgcgctttgtcgctgaagcaatcgcg
aaattcctcggtgtgcatcaacgtgatatgagctatgccgggatgaaagaccgccatgcg
gtgaccgagcagacgctgtgtttccgcgtgccgggtaacgcgatgccgaatttggccggt
ttccagctggaaggtgtggaaattctgcaggtgatccgccataagcgcaaattgcgcact
ggcgcgctagcaggtaatgcgttccgcttggttgtgcgtcagatttcggatcgcgctgaa
gtggaagcgcgcttgcagcatatccagcaaagcggcgtgcctaactactttggtgaacaa
cgctttggccgcggcggcaataacctgacgcaggcaaaattgtgggcagaagataagttc
cgcccgcgcgatcgcagcatgaaaggtattttgctgtccgctgcgcgcagccagctattt
aatcaggtcaccagtgcgcgtttgcagcgtgatggcgtgttggatcaagtgcaggagggc
gatgcgctgcagctggccggacgcggcagctggtttgtggcgcaggcagaagagttggcg
gaattgcagcagcgtgtgaatcatcatgaactgcgcatcaccgcgccgctcgccgggcga
ggtgagctgggcccccagggagacgcgctggcctttgagcaggctaatctcgcacctgct
gcggatttgctggcgctgctggagcgtgaacgcgttgacgcggcacgccgcgccatgctg
gtggtgccgaaagatctgcgctggaactggtgggatgacgtgacgctggagatgcagttt
tggctgccagccgggagttttgccaccagcgtggtgcgcgaactgctgagtaacggtgcc
gctgcgcctatcagcgaggaataa
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