Pantoea rwandensis: LH22_09085
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Entry
LH22_09085 CDS
T03331
Name
(GenBank) ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
kln
Pantoea rwandensis
Pathway
kln02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LH22_09085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kln02000
]
LH22_09085
02044 Secretion system [BR:
kln02044
]
LH22_09085
Transporters [BR:
kln02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LH22_09085
Secretion system [BR:
kln02044
]
Type I secretion system
Adhesin protein transporter
LH22_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
MMR_HSR1
AAA_29
RsgA_GTPase
Dynamin_N
AAA_22
NACHT
nSTAND3
ATP-synt_ab
AAA_28
TsaE
Motif
Other DBs
NCBI-ProteinID:
AIR85614
LinkDB
All DBs
Position
1942480..1944612
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AA seq
710 aa
AA seq
DB search
MNSQPNLSDNLIAAMLRAAAHLGKTADHLRLQQQMRWFAHLAPLQQLARMAELLGLHCTS
ATQQQLRWGPDVTPILLMLNNGGIALLEEINHAGEVRYWLSEGGNVIREGQLSELLAQSL
PEVGVIGVAARGRDQRIDEFMQPYQPHWFWQHFRGMQRRIVEISLASVVGNVLALAGILF
SMQVYDRVIPAQSQSTLWVLFSGVLLAVGIEYLIRLMRTQVADLMGKRIDLRLSSMLFAR
AMNIRNEARPRSTGAFIAQLREIDQVRELLTSTTVGAAADLPFVLLFLFIMASIGGWLVI
IPLLAIPLIVIPGLLIQIPMARLAQEGLREGALRQAVLVETLEGVEDIKALQAEPYFQRQ
WEQTHEVSAAVSNQQRLWGARLTGWAASVQQLTYASMLVFGVYLILNNQITTGTLVASSL
LSSRTLAPLMQLTMVFSRWQHAKSAMKGLDALLQKPLDRPEHQSLAHSPVLRGHFKLQDV
RYRYEEESHLSVLNIAQLEIHPGERVAILGKVGAGKSTLLKMLAGQARATQGRVWVDGVD
MAGIDPIDLRRQLGWLSQDARLFFGTLRQNLLLGNPHASEQEMLQALRISGALAMVQQDA
ASLDRVIQEGGRGLSGGQRQMILLSRLILRQPQVVLLDEPTAAMDEALEAQVIRQLSQWM
TDRTLVLVTHRPALLRMVERIVVMDNGRIVADGAREEILRHAVSMKGGAA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacaaccgaatctcagcgacaatcttatcgctgccatgctgcgtgccgccgcg
catttgggtaaaaccgctgaccaccttaggttacagcagcagatgcgctggtttgcgcat
ctggcgccgctgcaacaattagcgcgcatggccgagttgcttggcctgcactgtacctct
gcgacacagcagcaactgcgctggggacccgacgtcacgcccatattattgatgctaaat
aacggtgggattgcgttgctggaagagatcaatcacgcgggagaggtgcgttactggtta
agtgaaggcggtaatgtcatacgcgaaggtcaactcagcgagttactggcgcagagccta
ccggaagtcggtgtcatcggtgtggcggcccgcgggcgtgaccaacgcatcgatgagttt
atgcagccctatcagccgcattggttctggcaacattttcgaggcatgcagcggcgtatc
gtcgaaatcagcctggcttccgtggtcgggaatgtgctggcactggccgggattctgttt
tcaatgcaggtctatgaccgggttatcccggcgcaatcgcaatccactttgtgggtgctc
ttctcgggggtgttgctggcagtaggcatcgagtatctgattcgcttaatgcgtactcaa
gtggcggatctcatggggaagcgtatcgacttaaggctttcttcgatgctgttcgcacgc
gccatgaacatccgtaatgaggcgcgcccccgatccactggcgcatttattgcgcaactg
cgtgaaatcgatcaggttcgagaactgctgacctctaccaccgtcggggcggccgccgat
cttccttttgtgctgctgtttttattcatcatggcgtcaatcggcggctggctggtgatc
attccactgctggctatcccgctgattgtgatccccggtttactgatacaaattccgatg
gcacgcctggcacaggaaggtctccgtgagggggcgttgcgtcaggcggtattggtggaa
acgttggaaggtgtagaagatattaaagcgctgcaagcggaaccctattttcagcgccag
tgggagcaaacgcacgaagtcagtgccgccgtgagcaatcagcaacggctctggggtgcg
cgcttaaccgggtgggcggccagcgtgcaacaacttacctatgccagcatgctggtcttc
ggtgtctacctgattttaaacaaccagattacgacgggtacgctggtggccagtagtttg
ctctcttcacgtactctcgcgccactcatgcaactcaccatggtgttttcccgctggcag
catgctaaatccgccatgaaagggctcgatgcactgctgcaaaaaccactcgaccgcccg
gagcaccaaagtcttgcgcacagccccgtgttgagaggccacttcaagttgcaagatgtg
cgctatcgctatgaagaagaaagtcacctgagcgtcctgaatattgcgcagttggagatt
catcccggtgagcgggtggcaattctcggcaaagtgggggcgggaaaatcgacgctgctg
aaaatgttggccggtcaggcgcgagcgacgcagggtagggtctgggtagatggtgtggat
atggcggggattgatcccatcgatctgcgccgccaactgggttggttgtcccaggatgcg
cgtttgttttttgggacgctacgtcagaatttgctactcggtaatccccatgcgagtgaa
caggagatgctgcaagcgttgcgcatcagcggggcgctggcgatggtgcaacaagatgcc
gcgagtcttgatcgggtgattcaggaaggtgggcgcggcttatcgggtgggcaacggcaa
atgatactgctcagtcgattaatcttgcgacagccccaggtggtgctgctggacgaaccc
accgcggcgatggatgaggcgctggaagcgcaggtgattcgtcagttgtctcagtggatg
acggaccgcacgctggtgttggtcacccatcgcccagcgctgctgcggatggtggagcgt
attgtggtgatggataacgggcgtattgtggccgatggtgctcgtgaggagatattgcgc
catgctgtgagcatgaaaggcggtgcggcatga
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