Pantoea rwandensis: LH22_09180
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Entry
LH22_09180 CDS
T03331
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kln03400
]
LH22_09180
DNA repair and recombination proteins [BR:
kln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
LH22_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
DUF7577
zf-tcix
SLFN-g3_helicase
Zn_Ribbon_1
AAA_16
AAA_22
DZR
Zot
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
AIR85629
LinkDB
All DBs
Position
complement(1958392..1960146)
Genome browser
AA seq
584 aa
AA seq
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MSFTLRPYQQEAVDATLQHFRRHDAPAVIVLPTGAGKSLVIAELARIARGRVLVLAHVKE
LVEQNHSKYQAYGLEADIFAAGLQRKQSESKVVFGSVQSVARNLDRFDSAFSLVIVDECH
RISDNEESQYQQLFAHLRQHNPQLRLLGLTATPFRLGKGWIYQFHYHGMVRGDQHALFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLIPQNNGLFSEADLNRELKQQNRVTPH
IIRQIVEFAEDRRGVMVFAATVEHAREILSLMPENSALVSAETVVKERDRLISEFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNPH
DLFTPEVGTPKGASDNQPVQVFCPACGFANTFWGKTTEDGHIIEHFGRRCQGVMEDDEGN
REQCDYRFRFKSCPDCGAENDIAARRCHQCDRIMVDPDDMLKAALKLKDARVLRCGGMTL
EQGRDEKGEWLKATYFDEDGTSVSERFRLQTPAQRKAFEQLFMRPHQRAPGVELGWQTAA
DVIALQPLLRHPDFVVARAKGHFWQIREKMFDYQGRYRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaccctgcgcccataccagcaagaggcggttgacgccacgctccagcatttt
cgccgccacgatgcgcccgccgtgatcgtgttgccgacgggtgccggtaaaagtctggtg
atcgctgaactggcgcggattgccagaggccgcgtgctggtgttggcgcatgtgaaagag
ctggtcgagcagaatcacagtaaatatcaggcgtatggtctggaggccgatatttttgcc
gccggtttgcagcgcaaacagagcgaaagcaaagtggtttttggcagcgtgcagtcggtg
gcgcgcaatctggatcgcttcgacagtgccttctccctggtgatcgttgatgagtgtcac
cgcatcagcgacaacgaagagagccagtatcaacagctgttcgcccatctgcgacagcac
aatccgcagctgcggctgcttgggttgaccgccacccctttccgcctcggtaaaggctgg
atttatcagtttcactatcacggcatggtgcgcggcgatcagcacgcgttattccgtgac
tgtatttatgaattgccgctgcgctacatgatcaagcacggtttccttgtgccgcccgaa
cggctggatatgccggtagtacagtacgatttcagccgcctgatcccgcaaaacaacggc
ttattcagcgaagccgatctcaatcgcgaattgaagcagcagaatcgcgtgacgccgcac
atcatcagacagatcgtggagttcgcggaagatcgccgtggtgtgatggtgttcgccgcc
acggtagaacatgcgcgtgaaattttatctctgatgcccgagaacagcgcgttggtatct
gcggaaaccgtggtgaaagaacgcgaccgtttgatcagcgaatttaaagcgcagcagtta
aagtttttagtgaacgtcgcggtgctgaccaccggctttgatgcgccacacgtcgatctc
atcgccattctgcgccctactgaatctgtcagcctgtatcagcaaatcgtcgggcgcggc
ctgcgtttgtcaccgggcaaaaccgattgcctgatcctcgattacgccggcaatccgcac
gatctctttacaccggaagtcggcacgccaaagggcgccagtgacaaccagccggtgcag
gtgttctgccccgcctgtggtttcgccaataccttctggggaaaaaccaccgaagacggc
cacatcattgaacattttggtcgtcgctgtcagggcgtgatggaggatgatgagggcaat
cgtgaacagtgtgactatcgcttccgctttaaaagttgtcccgactgcggtgcagaaaac
gatattgcggctcgccgctgccatcagtgcgatcgtattatggtcgacccggatgatatg
ttgaaagccgcgctaaaacttaaagatgcacgcgtgctgcgctgcggcggtatgacgctg
gaacaaggacgtgacgagaaaggggaatggttaaaagcgacctactttgatgaagatggc
accagcgtcagtgaacgtttccgtctgcaaacgcctgcacaacgtaaagcctttgagcag
ctgtttatgcgcccacaccagcgcgcacccggcgtggaactcggttggcaaacggctgcg
gatgttatcgctttgcagccactgctgcgccatcccgattttgtggtggcacgcgcgaaa
ggtcatttctggcaaattcgcgagaagatgttcgattatcagggacgttatcggcgcgcg
aatgagctgcgttaa
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