Pantoea rwandensis: LH22_11495
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Entry
LH22_11495 CDS
T03331
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
kln
Pantoea rwandensis
Pathway
kln00061
Fatty acid biosynthesis
kln00071
Fatty acid degradation
kln01100
Metabolic pathways
kln01212
Fatty acid metabolism
kln02024
Quorum sensing
kln04146
Peroxisome
Module
kln_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LH22_11495
00071 Fatty acid degradation
LH22_11495
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LH22_11495
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH22_11495
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
kln01004
]
LH22_11495
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kln04147
]
LH22_11495
Enzymes [BR:
kln01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LH22_11495
Lipid biosynthesis proteins [BR:
kln01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LH22_11495
Exosome [BR:
kln04147
]
Exosomal proteins
Exosomal proteins of breast milk
LH22_11495
Exosomal proteins of breast cancer cells
LH22_11495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AIR86052
LinkDB
All DBs
Position
2449683..2451392
Genome browser
AA seq
569 aa
AA seq
DB search
MATQQEYRGDSLNKVWLKRYPADVPAEINADRYTSLVELFEHAALQYADQTAFINMGQPM
TYRQLDKQSRDFAAWLQQGLGLKQGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYT
PRELKHQLNDSGASAIVIVSNFAHTLEKVVAETPIKHVMLTRMGDQLAPIKATLVNFVVK
YVKKLVPKYHLPGAVPFRSALQQGAQMTYQRPTLTNSDLAFLQYTGGTTGVAKGAMLTHG
NMQANLEQTKATYGKLLRAGKEQVVTALPLYHIFALTVNGLLFLDLGGANLLITNPRDIP
GFVKELSKFPFTAITGVNTLFNALLNDENFNKLDFSTLRLSAGGGMAVQKAVAERWEKLT
GHYLLEGYGLTECSPLVSVNPYDITCHTGSIGLPVPSTDVRIVDDEDNDVAPGEPGELCI
RGPQVMVGYWQRPDATEEVLKNGWLHTGDVVTVDGEGFIRIVDRKKDMILVSGFNVYPNE
IEDVLMQHPKVREAAAIGVPSDLSGEAVKVCIVKKDPSLTKEEVLDHCRRQLTGYKVPKI
IEFRDELPKTNVGKILRRELREEAKREGQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcaacaagaatatcggggtgattctttgaataaggtttggcttaaacgctat
ccggcagatgttcctgcggagattaatgcggaccgttatacctctttggtcgaacttttc
gagcacgcagcattgcagtacgccgatcaaacggcgtttattaatatgggtcagccgatg
acctatcgtcagctggataagcaaagtcgtgactttgcggcctggctgcaacaggggttg
ggcctgaagcagggcgaccgcgtggcgctgatgatgccaaacttgctgcagtatccggtg
gcgctgtttggcgtattgcgtgcgggtatggtggtggtcaacgttaacccgctgtacacg
ccgcgtgagctcaaacatcagctgaatgacagcggtgccagtgcgattgtcattgtgtct
aactttgcgcacacgctggaaaaagtcgtcgcggaaacgccaatcaagcacgtgatgctg
acgcgcatgggtgaccaacttgccccgatcaaagccacgctggttaatttcgtggttaag
tatgttaagaagctggtgccgaaataccatctgccaggtgcggtgccattccgcagcgca
ttgcagcagggtgcgcagatgacttaccagcgtccgacactgacgaacagcgacctggca
ttcctgcaatacaccggcggcaccaccggcgtcgccaagggcgcgatgctgactcacggc
aacatgcaggctaacctggagcagaccaaagccacctatggcaaactgctgcgtgcgggc
aaagagcaggtggtcacggctctgccgctctaccatatttttgcgttaacggtaaacggc
ctgctgtttctcgatctcggcggtgccaacctgctgatcaccaatccgcgtgatatcccc
ggttttgtcaaagagctgagcaaattcccgttcaccgccattaccggcgtcaatacgctg
tttaacgcgctgctaaacgacgaaaactttaataagctcgatttctctacgctgcgtctc
tctgctggcggcggcatggccgtgcaaaaggccgtggctgagcgctgggaaaaactcacc
gggcattatctgctcgaaggttatggtttgaccgagtgttcaccgctggtatcggtcaat
ccgtatgacatcacttgccacaccggcagcatcggtcttcctgtaccctccacggatgtg
cgtatcgtcgatgacgaagataacgatgtggcgccaggcgaaccgggcgaactctgtatt
cgtggtccacaggtgatggtgggttactggcagcgaccggatgccaccgaagaagtgttg
aaaaatggctggctgcacaccggtgatgttgttaccgttgatggcgaaggttttattcgc
atcgtcgatcggaagaaggacatgattctggtgtcaggctttaacgtgtatcctaacgaa
atcgaagatgtgctgatgcagcatccgaaagtgcgcgaagccgccgcaatcggtgtgccc
agcgacctttccggcgaagcggtgaaagtgtgcatcgttaaaaaggatccgtcactgacg
aaagaagaagtgctggatcattgccgccgtcagctcaccggctacaaagtgccgaagatt
attgagtttagagatgagctgccgaagaccaacgtgggcaaaattttgcgccgcgaattg
cgtgaagaggcgaagcgagaagggcagtaa
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