Pantoea rwandensis: LH22_11500
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Entry
LH22_11500 CDS
T03331
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kln03016
]
LH22_11500
Enzymes [BR:
kln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LH22_11500
Transfer RNA biogenesis [BR:
kln03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LH22_11500
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIR86053
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All DBs
Position
2451491..2452612
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AA seq
373 aa
AA seq
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MNYTLIDQNSQLAAVCEQARQHDAVALDTEFVRTRTYYPQLGLIQLFDGEQLVLIDPLNI
SDWTPFIALLQDKQVTKFLHAGGEDLEVFLHRFKCLPDPMIDTQILAAFAGQPLSWGFAS
MVNHFNQIELDKSESRTDWLARPLTERQCDYAAADVAYLLPIAHQLVEQTQAAGNMAAAL
SECDNLCQRRLDVLQPEDAWRDITNAWQLRPRQLAALQRLAAWRLNIARQKDMAVNFVVR
EENLWKVARFMPGSLGELDHLGLNGHEIRFHGKAMVALVAEAQAQDEATLPQPLPNLIDH
PHYKQAFKAIKALVLQVSEETGFSQELLASRRQINQVLSVYWGLKSGCRTPELLTGWRGE
LLQKRIDEILQAL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgaattacactttgatcgaccaaaacagccagctggctgccgtgtgcgaacaagcgcgc
cagcatgatgccgttgcgctggatactgaattcgtgcgcacgcgcacttactatccgcag
ttgggtctgatccagctgttcgatggtgaacaactggttctgatcgatccgcttaacatc
agtgactggacgccgttcatcgcactgctgcaagacaagcaggtgacaaaattcctgcac
gccggtggcgaagatcttgaagttttcttgcatcgttttaaatgcctgcccgatccgatg
atcgatactcaaatcctggcggccttcgctgggcagccgctgtcatggggcttcgcttcg
atggttaatcactttaaccaaatcgaactggataagagcgaatcccgtactgactggctg
gcgcgcccgctgactgagcgtcaatgcgactatgctgcagcagatgtcgcgtatcttctg
ccgattgcccatcagttagttgagcagacgcaagccgcaggcaacatggctgcagcgctg
agcgaatgcgataatctttgccagcgccgtcttgacgttttgcagccagaggatgcatgg
cgcgacatcaccaacgcatggcagttgcgtccgcgccagttggcagcgctgcaacgcctg
gcggcatggcgcttgaacatcgcccgccagaaagacatggccgtgaattttgtggtacgt
gaagagaatctgtggaaagtagcgcgctttatgccgggtagcctgggggaactcgatcat
ctgggcctgaacggtcatgaaatccgcttccacgggaaagcgatggtggcgctggtggcg
gaagctcaggctcaggatgaagcgaccttgccacaaccgttgcccaatctgattgaccat
ccacattacaaacaggcatttaaagccatcaaagcgctggtgttacaggtaagcgaagag
acgggtttcagtcaggagctattggcttcacgtcgccaaatcaatcaggtgttaagcgtt
tactggggtttgaaaagcggatgccgtacaccagaattactgactggctggcgtggtgaa
ttgctgcaaaaacgaatcgacgagatcctgcaggcgctataa
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