Pantoea rwandensis: LH22_14265
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Entry
LH22_14265 CDS
T03331
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kln03000
]
LH22_14265
Transcription factors [BR:
kln03000
]
Prokaryotic type
Other transcription factors
Others
LH22_14265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_19
AAA_22
MCM
NACHT
T2SSE
AAA_14
AAA_30
BrxC_BrxD
AAA_7
AAA_2
GYF
Methyltransf_32
ATPase_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIR86563
LinkDB
All DBs
Position
complement(3040069..3041643)
Genome browser
AA seq
524 aa
AA seq
DB search
MKRRVVIGVLGTQLDKRGKRQNRWSKWRPSVALCQHADLPVDRFEVLHQPLNRGMVEQLT
EDIARISPQTQVVPHQISLDDPWDFEEVYGAFLDFARNYPFDTENEEYLVHITTGSHVAQ
ICWFLLTEARFLPASLLQTGPGPKEEKSPQGVYSIIDLDLSRYTTLTSRFQHEQQNSVSF
LKSGIETRSAIFNALIEQIERVAQRSDAPMLLSGPTGAGKSFLAERIYQLRLARHQVKGK
FVAVNCATLRGDNAMSTLFGHVKGAFTGALTARSGLLREADGGILFLDEVAELGLDEQAM
LLRAIEEKRFFPFGADREVSSDFQLIAGTHRDMRQWVKEGRFREDLYARINMWTFQLPGL
AERREDIEPNIDYELQRFTRTRQHQVRFDKEARQHYVAFATSPAAAWHGNFRELGASVMR
MATLAEDGRISLMLVDEEIARLRLNWQSERVASPLLPMVGDIDLFEQRQLETVLEVCRHA
TTLSEAGRHLFSVSRQHKKQPNDADRLRKYLMRFGLNWEDIQKK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgacgggtagtgataggtgttttaggcacgcaactcgacaaacgtggcaaaagg
caaaaccgctggagtaagtggcggcccagtgtggcgctgtgtcagcatgccgatttgccc
gtggaccggtttgaggtactgcatcaaccgctgaatcgcggcatggtggaacaactgact
gaagatatcgcgcgcatttctccccagactcaggtggtgcctcatcaaatcagtctcgac
gacccctgggattttgaagaggtgtacggtgcttttcttgattttgctcgcaactatccc
ttcgataccgaaaatgaagagtatctggtccacatcaccaccggctcgcacgttgcgcaa
atatgctggttcctgttaaccgaagcacgctttctgcctgctagcctgttacagactgga
ccggggccgaaggaggagaaatcccctcagggcgtttactcgattattgatttggacttg
agtcgctataccactctgaccagtcgttttcagcacgaacaacagaattccgtgtcgttc
cttaaatcaggcattgaaacgcgcagcgccatttttaacgccctgattgaacaaattgag
cgggtggcgcagcgctctgatgcgccaatgttgctaagcgggccgacgggggcggggaaa
tccttcctcgctgagcgtatctatcaattgcgtctcgcacgtcatcaggtgaagggcaag
tttgtcgcggtcaattgcgcgacgctgcgtggtgataacgccatgtcaacgctgtttggc
cacgttaaaggggcctttacgggggcattaacggcacgcagcggcttattgcgtgaagcg
gatggtggcattctctttcttgatgaagttgctgaactgggtctggatgaacaggcgatg
ttattacgcgccattgaagagaaacgttttttcccgtttggagccgatcgtgaagtgagc
agtgatttccagcttattgcgggcacgcaccgtgacatgcgccaatgggtaaaagagggg
cgcttcagggaggacctttacgcacgcatcaatatgtggacattccagctgccgggactg
gcagagcgtcgcgaggatattgaaccgaatatcgactatgaattgcagcgatttacgcgc
acgcgtcagcatcaggtgcggtttgataaagaagcgcgtcagcattatgtggcttttgcc
acctcaccagcagctgcatggcacggtaactttcgtgaactgggtgccagtgttatgcga
atggcaacactggctgaagacgggcgtatttcactgatgctggtagacgaggagatcgcg
cgattacgcttaaactggcagagtgagcgagtggcatcacccttactgccgatggttggc
gatattgatctcttcgagcaaagacaactcgagacggtgctggaagtctgtcgacacgcc
acaacattatcagaagcgggacgacatttattttcggtctcacggcagcataaaaagcag
ccgaatgatgccgatcgcttacgtaaatacctcatgcgcttcgggctgaattgggaagat
atccagaaaaaatga
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