Pantoea rwandensis: LH22_15550
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Entry
LH22_15550 CDS
T03331
Name
(GenBank) lipid transporter ATP-binding/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
kln
Pantoea rwandensis
Pathway
kln02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LH22_15550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kln02000
]
LH22_15550
Enzymes [BR:
kln01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LH22_15550
Transporters [BR:
kln02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LH22_15550
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
DUF87
Zeta_toxin
AAA_22
RsgA_GTPase
AAA_16
AAA_25
APS_kinase
HUTI_composite_bact
nSTAND3
AAA_29
AAA_24
AAA_30
AAA_18
MMR_HSR1
Ploopntkinase3
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
AIR86807
LinkDB
All DBs
Position
complement(3299980..3301728)
Genome browser
AA seq
582 aa
AA seq
DB search
MHQDKDLSTWQTFRRLWPMIAPHKAGLFVSAVALILNAAGDTLMLSLLKPLLDDGFGKAD
RSVMLWMPLVVIGLMLVRGVTSYISSYCISWVSGNVVMNMRRRLFGHMMGMPVAFFDQQS
TGTLLSRITYDSEQVASSSSSALVTVVREGASIIGLFIMMFYYSWQLSLILIVLAPIVSF
AIRTVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQDVEAQRFSLVSNKMRQQ
GMKLVSASSISDPVIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDSEQEIDNGKREITRAKGDVEFRNVTFTYPGREVPALR
DINLSLPEGKTVALVGRSGSGKSTMASLLTRFYDIDAGEILLDGHDLREYTLRSLRNQVA
LVSQNVHLFNDTIANNIAYARNGEYTREQIEQAATMAHAMDFIKKMDNGLDTVIGENGVL
LSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS
TIEKADEIVVVEDGRIVERGTHSALLAEKGAYAQLHKLQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagacaaagatctctcaacgtggcaaacgttccgccgactctggccgatgatt
gcgccgcacaaagcaggactgtttgtgtctgcggtggcgctgattcttaatgcggccggc
gataccttaatgttgtcgctgttgaaacctttactggatgatggcttcggtaaggccgat
cgttccgtcatgctttggatgcctctggtggtgattggcctgatgctggtgcgtggcgtg
accagctacatttccagttattgcatctcttgggtatcgggcaacgtggtcatgaatatg
cgtcgccgcttgtttggccacatgatgggcatgcccgtggcgttctttgaccagcaatca
accggcacattgctgtcacgcatcacttatgattccgagcaagttgcttcgtcctcttcc
agtgcactggtgacggtcgtacgcgaaggtgcctcgatcattggcctgtttatcatgatg
ttctactacagctggcagctgtcgttgattttgattgtccttgcgccgattgtttccttt
gcgattcgcacggtgtccaaacgcttccgcagcatcagtaaaaacatgcagaacaccatg
ggacaagtcaccaccagcgcggaacagatgctaaaagggcataaagaggtgctgatcttc
ggtggccaggatgttgaagcgcagcgtttctcgctggtgagcaacaaaatgcgccagcag
ggcatgaaactggtttcggcctcttccatttccgatccggtcattcagctgattgcttct
ctggccctggcgttcgtgctctacgctgccagtttccctagcgtgatggaaaccctcacc
gccggtaccatcaccgtggtgttctcatcaatgattgccttgatgcgcccattgaagtca
ctgactaacgtcaacgcccagttccagcgcggtatggctgcttgtcagaccttgttctca
attctggatagcgagcaggaaatcgataatggcaagcgtgaaatcacgcgtgccaaaggc
gatgtggaattccgcaatgtgactttcacttatccgggacgtgaagtgcctgcgctgcgt
gatattaatctgtcgctgccagagggcaagacggtggcgctggtagggcgttctggttcg
ggtaaatcgaccatggcgagcctgctgacccgcttctacgatattgatgccggcgaaatt
ctgctcgacggtcacgatctgcgcgaatataccttgcgctccctgcgtaatcaggtggcg
ctggtttcccagaatgtccatctgttcaatgacaccatcgccaataacattgcttatgca
cgcaatggtgaatacacccgcgaacagattgaacaggcagcgactatggcgcacgccatg
gacttcattaagaagatggacaacggtctggataccgtgattggtgagaacggcgtgttg
ctatcaggtggccagcgccaacgtatcgccatcgcgcgcgcattgctgcgtgattgcccg
attctgatcctagatgaagcgacctcagcattggataccgaatccgagcgcgcgattcag
gccgctctggatgagctgcagaaaaaccgcacttcgctggttatcgcacaccgcctgtcg
accatcgaaaaagccgatgaaatagtggtcgtcgaagatggtcgtatcgttgagcgcggt
acgcacagcgcgctgctggccgaaaagggtgcctatgctcagcttcacaaactgcagttt
ggtcaatga
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