Pantoea rwandensis: LH22_15585
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Entry
LH22_15585 CDS
T03331
Name
(GenBank) ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kln03009
]
LH22_15585
Ribosome biogenesis [BR:
kln03009
]
Prokaryotic type
ribosomal protein modification factors
LH22_15585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AIR86814
UniProt:
A0ABM5RLE0
LinkDB
All DBs
Position
3310034..3311794
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQHKLQDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFWLGQSIANGDFVHYPNEKWFPLTDDDSLPAG
ILDARLQKFYDPEDSLSASDLIDLQSGNVDRGICGLPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERHIKNRIIAESISLPEIPAEVMQRYPGVIEAIERLEAE
GFPIFSYDASLGGKYPVICLVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKDDADYPFVDWSFSGSTHEEFDTLM
AIFRAEDQEVYIADYEHLGVYACRIIVPGMSDIYPAEDLLLANNSMGAPLRETLLALPAS
EWEPEAYLNLIEQLDEEGHDDFTRVRELLGLASGKDNGWYTLRIGELKAMLALAGGDLDQ
ALIWTEWTMEFNQSIFSAERANYYRCLQTLLLLAMEEERDPLQYHRAFVRMYGEAAVDAA
SAAISGEAPFYGLQAVDLDLKAFPAHQALLAAYEKLQAAKRNYWSK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacgtttattccaggaaaagacgccgcactggaagactccatcgcacgtttc
cagcacaaactgcaggacctgggcttcaacattgaagaagcctcctggctgaacccggtt
ccacacgtctggtctgtgcatatccgcgatcgcgactgcccgctgtgctttaccaatggt
aaaggtgccagtaagaaagcggcactggcttcggcgttaggcgaatattttgagcgtctc
tcaaccaactacttcttcgccgatttctggctcggtcagtccatcgccaacggcgatttc
gttcactacccgaatgagaagtggttcccattgaccgacgatgacagcttgccagcaggg
attctggatgcgcgtctgcagaaattttacgatcctgaagatagcctgagcgcctcagat
ctgattgacctgcagtcaggtaatgttgaccgtggtatctgcggcctgccatttacccgt
caatccgaccagcagacggtctacatcccgatgaacatcatcggcaacctgtatgtttct
aacggcatgtctgccggtaacaccgcgaacgaagcgcgtgtacagggcctgtctgaagtc
tttgagcgccacattaaaaaccgcattatcgctgagtcaattagcctgccagaaatccct
gctgaagtgatgcagcgctaccccggcgtgattgaggcgattgaacgtctggaagccgaa
ggtttcccaatcttctcttacgatgcttcactgggcggcaagtacccggttatctgccta
gtgttgttcaacccggccaacggcacttgctttgcttcattcggcgcgcacccagacttt
ggtgtggcattggaacgtaccgttactgaactgctccagggccgtggactgaaagacctg
gatgtcttcaccccaccaaccttcgatgatgaagaagtggctgaacacgccaacctggaa
acccactttatcgattcaagtggtttaatctcctgggacatgttcaaagacgatgcggat
tatcctttcgtcgactggagcttctcaggcagcacgcatgaagagtttgatacgctgatg
gccatcttccgcgcggaagatcaagaggtttacatcgcggattatgagcatctgggcgtt
tacgcctgccgtatcatcgtaccgggcatgtcagatatttatccggcagaagacctgtta
ttggccaacaacagcatgggcgcgccgctgcgtgaaaccttgctggcgctgccagccagt
gagtgggaaccggaagcgtatctgaacctcatcgagcagttggatgaagaaggtcatgac
gacttcactcgcgtccgtgagctgctgggtctggcgtcaggtaaagacaatggctggtac
accctgcgtattggcgagttgaaagccatgctggcattggcgggcggagatctggatcag
gctctgatctggacggagtggaccatggagttcaaccagtcaatcttcagcgccgaacgc
gccaactattaccgttgcctgcaaaccctgctgttgctcgccatggaagaagaacgcgat
ccgctgcaatatcatcgtgcctttgtgcggatgtatggcgaagccgctgttgatgccgct
tctgcagcgatcagcggtgaagcgccattctacggcttgcaggcagtggacctcgatctg
aaagccttcccggcgcatcaggccctgctggccgcctatgaaaaactgcaggcagcaaag
cgcaactactggtcgaagtaa
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