Pantoea rwandensis: LH22_15985
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Entry
LH22_15985 CDS
T03331
Name
(GenBank) mechanosensitive channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kln02000
]
LH22_15985
Transporters [BR:
kln02000
]
Other transporters
Pores ion channels [TC:
1
]
LH22_15985
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AIR86891
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Position
3398042..3400315
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AA seq
757 aa
AA seq
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MSFARPSWCLTIWMLLCLFLVPTANAVNLPQAAVAAQQTSTPAANTTAEAEPTLEDKKAA
YAALANILENNDSRQELIDQLRQAATSKANNEQPVLAPPQAEQEDPTVLESVTNVTREYG
GAVASQFVRLHDNIVNAPHKSFNQQTFFNALRYFAGLAAAVFAFYWFTRLLMYPVWQRMG
RWGRNHNLERTKWLHLPVTIVVAFLLDLLLLALTLFVGQIISDNYHNNNRTIAYQQGLFL
NAFALIEFFKAVLRLIFCPRFPTLRFFHLSDARAAYWNTRLSWLSGTIGYGLLVVVPIVG
NQVNMQIAALVNMLIMCIMTGWALWLIFRNRRNIHDELSRLADRSMSFFALFIRAFGMVW
HWLASAYFIALFLFSIFNPGDSLKFMMSATVRSMAIIVIAALVSGMLTRWIGKTLTLSPD
LRRNYPELQKRVNDWVKALLKLARVITVFATLLLLLNAWNLFDLWHWLTLGAGQKMVDVL
IRIVMILLLSAIGWTLLASLIESRLASDSHGRPMPSARTRTLLTLFRNALAVVISTITIM
ILLSEVGVNIAPLLAGAGALGLAVSFGSQTLVKDIITGIFIQFENGMNTGDLVTIGPITG
TVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSFVANYDVDRSEDTERVNATLQ
AAVKALLENPDIRGMVIGEPSFSGLVGLTNQSFTVRVSFTTQPLKQWTVRFALDDKVKKH
FDAAGIRTPHQTVEVMQTGNDVASAATLAALPPPNPS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgcccgcccatcatggtgcctcaccatatggatgctgctctgtctgttcctc
gttcccaccgcaaacgcggtcaatctgccgcaggccgccgtcgccgctcaacaaacgtca
acgcccgctgccaacaccaccgctgaagcagagccaacgctggaagataaaaaagccgct
tatgccgcgctggcgaatattctggagaataacgattcgcgtcaggaattgatcgatcag
ctgcgtcaggccgccaccagtaaagccaacaatgaacaacccgtcctggcaccaccgcag
gctgagcaggaagatcccacggtactggagagcgtcaccaacgtcacacgcgaatacggg
ggcgccgttgcctcgcagtttgtccgtttgcacgacaacatcgttaacgcgccgcacaaa
tcctttaatcagcaaaccttcttcaatgcactgaggtatttcgccgggctcgccgctgcc
gtttttgctttttactggttcacgcggctgttgatgtatcccgtgtggcagcgcatgggc
cgctgggggcgcaatcataatctggaacgcaccaagtggctgcatcttcctgtcaccatc
gtcgtcgcttttctgctcgacttactgcttctggcgctgacgctgtttgtgggtcagatc
atcagtgataactaccacaacaacaaccgcaccattgcctatcagcaggggctgttcctc
aatgccttcgcgttgattgagtttttcaaagcggtgttgcgattgatattctgcccacgc
ttccccacactgcgcttctttcatctttccgatgcacgcgccgcatactggaacacgcgt
ctcagctggctcagcggcaccattggttatggcttgctggtggtggtgccgatcgtcggc
aatcaggtcaatatgcaaatcgctgcattggtgaatatgctgatcatgtgcattatgacc
ggctgggcgctgtggttgattttccgcaatcgacgcaacatccacgatgaattatcgcgt
ttggccgatcgcagtatgagcttctttgccttgtttatccgcgccttcggcatggtgtgg
cattggctggcgagcgcctactttatcgcgctgttcctgttctcgatcttcaatccgggt
gacagcctgaagtttatgatgtcggccacggtacgcagcatggcgattattgttatcgct
gcactggtttctggcatgctgacgcgctggattggcaaaacgctcacgctgtcgccggat
ctgcgtcgcaactatcctgagctgcagaaacgcgtcaatgactgggtgaaagcactgctg
aaactggcgcgggtgatcaccgtgttcgccacgctactgctgctgctcaatgcctggaat
ctgtttgatctctggcactggctcacgctgggagccgggcagaaaatggtggatgtgctg
attcgtatcgtgatgattttactgctttccgccatcggctggacactgctggctagcctg
atcgaaagccgtctggcttcggattcacacggaaggccgatgcccagcgcacgtacgcgc
accttactgacgctattccgtaacgcgctggcggtggtgatcagcaccatcaccattatg
attctgctgtcagaagtgggcgttaacatcgcgccgctgctggcgggtgccggtgcgctg
gggctggcagtgtcattcggttcgcaaacgctggtgaaggatattatcaccggtatcttt
attcagtttgagaatggcatgaataccggcgatctggtgaccattggcccgattaccggc
acggtggagcgcatgtcgattcgttccgtcggcgtgcgacaggataccggtgcctatcac
atcattccctggtcttcgattaccactttcgccaactttgtgcgcggtattggctcgttt
gtcgccaactatgatgtagaccgcagtgaagacaccgagcgcgtgaatgcgaccttgcag
gcggcggtgaaagcgttgctggagaatccggatattcgcggcatggtgattggcgaaccg
agtttttccggactggtaggcttgaccaatcaatcctttaccgtgcgcgtctcattcacc
acccaaccgctgaagcagtggacagtgcgttttgcgctggatgataaggtgaagaagcat
tttgatgccgcagggattagaacgccgcatcagacggtggaagtgatgcagacgggtaac
gatgtggcttcggcggctacgctggcagcactgccgccgcccaatccatcgtag
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