Pantoea rwandensis: LH22_17780
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Entry
LH22_17780 CDS
T03331
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kln03400
]
LH22_17780
DNA repair and recombination proteins [BR:
kln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH22_17780
Archaeal homologous recombinant proteins
LH22_17780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AIR87215
UniProt:
A0ABM5RMP3
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All DBs
Position
3751889..3753100
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AA seq
403 aa
AA seq
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MRIIHTADWHLGQFFYSKSRAAEHQAFLDWLLAQIALHQVDALIIAGDLFDTGSPPSYAR
EMFNRFVVALQSTQCQLIVLAGNHDSVATLNESRELLACLNTRVITSATPQGEQQVLTLH
QRDGTPGALLCAIPYLRPRDILRSQAGQSGREKQISLLEAIEQHYQQCYAAALTERADRA
LPIIATGHLTTVGVTKSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQRIADSEHIR
YSGSPIPLSFDELGREKSIFLVEFSAQLDSVTALPIPLFQPMQMLKGSMAEIEQQLAQFS
DSDAGQPVWLDIEITTQEYLSDLQRRVEQLTEALPVEVLLVRRSREQRQRSLARMDNETL
SELKVEEVFARRLAQEEQLDAEQAEQLTQLFRTTLAALENPSA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcacaccgcggattggcatctcggtcagttcttttacagcaaaagccgg
gcggctgagcatcaggcctttctcgactggttgctggcccagattgccctgcatcaggtg
gatgccttaatcatcgccggcgacctgtttgataccggttcgccgccaagctatgcgcgc
gagatgtttaaccgctttgtggtagcgctgcaatcaacgcagtgccagttgatagtgctg
gcaggcaaccatgattccgttgccacactcaatgaatcgcgcgagttgcttgcctgtcta
aatacccgagtgatcaccagcgccacgccgcagggcgaacaacaggtgctgacgctgcat
cagcgcgatggcacgccgggcgcgctgctgtgcgccattccctatttacgcccgcgcgac
attctgcgcagccaggcaggacaatccgggcgcgagaagcagatctcactgctggaagcg
attgagcagcattatcagcaatgttatgccgcggcgctgaccgaacgggccgatcgcgca
cttcccatcattgccaccgggcatctcaccaccgttggggtaacgaaaagcgactcggta
cgtgatatctacatcggcacgctcgacgccttcccggcgcaggcgtttcctcccgccgat
tacatcgcgctcggccatattcaccgggcgcagcgtattgccgatagcgagcatattcgc
tacagcggctcacccattccgctcagttttgacgaactgggacgtgagaaaagcatattc
ctggtggagttcagcgctcagctggatagcgtcacagcgctgccgatcccgctgttccag
cccatgcagatgttaaagggctcaatggccgagattgagcagcagctggcgcagttcagc
gatagcgatgccggacagccggtgtggctggatattgaaattaccactcaggaatatttg
agtgatttgcagcgccgcgtggaacagttgaccgaagccctgccggtggaagtcctgctg
gtgcgccgcagccgcgaacagcgccagcgcagcctggcgcgtatggataacgaaaccctg
agcgaattgaaagttgaagaggtgtttgctcgccgtctggcgcaggaagaacagctggat
gccgaacaagccgagcagctcacgcaactgttccgcactactctcgccgcgctggagaat
ccgtctgcatga
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