Pantoea rwandensis: LH22_17785
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Entry
LH22_17785 CDS
T03331
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kln03400
]
LH22_17785
DNA repair and recombination proteins [BR:
kln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH22_17785
Archaeal homologous recombinant proteins
LH22_17785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
nSTAND3
cobW
MobB
Motif
Other DBs
NCBI-ProteinID:
AIR87216
LinkDB
All DBs
Position
3753097..3756774
Genome browser
AA seq
1225 aa
AA seq
DB search
MKILTLRFKNLNALRGEWFIDFRREPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR
LGVLSQTQNELITRDTAECLAEVEFEIKGEAWRAFWSQNRARGQADGKLQAPRVELARVA
DNQIVADKVGDKLKLIETLSGLDFDRFTRSMMLSQGQFAAFLNAKPGERAELLEELTGTE
IYGQISMQIYERWRTARSNLETLRARAGGMMLLDEGRRTELMQQVEALTAQEKMLSDQLE
QAQQQQQWLTQSHQLTQEQQQAEQANQDAEQAWQQAESDRQRLARAEPAEKLREKLQQRE
QLQQDQQLATQQAKQLHTQQQDAQTTLQQGEKSYHTAQQAREQALADQQQLETLLTEQVI
PLDQQIASRAEQLTEQQRLHAQQSLTVQQSQNALNQHQLTRERLQQQLAEQQTFRNREAA
VALWGPELTRWQADIARFDEREQALTQLRAQQQQQNALLTQQQQAIAEGDRALQPLQHAE
AQASQQRQQAEQALTSLEAAINSTALRAALTQHQHQRAPRHQLSLLAARWQSLQPQLQLR
QQKRAQLQQQHQRDEQALQALREDYKREHQALLDIRKICELERTIAQLADERARLQPEQP
CPLCGSCQHPAIEQYQQLQPGENQQRLAAQEALVSKLKESGTAKSEQQKLALQQQQVLQQ
EITEFEQQLAVAREHWQGLSGELALTCTLDQQDVFTAWQQQQDEQEAAQQQQLQQRENAA
RALQQAKDAHLLQQQQWQQRQSAQLLAQQQLNNLQQTLDELNQRETQAHSAWQQLAQQLE
QQLAAHQFALPDRDGRASWLATLQQRWQAWQQSERLLAELQPQLATADSEQSNLQNNLTR
EQQQLEALQHALSSLQQQHAEQQQQRQQLFGDRQVSAARQQQQATLQQCEQALAQQLQQW
QQAQSQLHSLNGQCEQIDSQLQAMQLRIQAAETAFNSALQHSHFIDEQALRSALLDEQDI
QHLRQHLQTLEQQRQQQIALRQQLAQRVTAHQQQRPAALSDEVAAGLAEQLESLRVALRD
NARQQGEAQQQLHSDAQQRQQQQSLLTQIANDEVQLTQLGRLNDLIGSAKGDKFRRFAQG
LTLDHLVWLANRQLDRLHGRYLLQRRVTDELELEVVDTWQADATRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIESLFLDEGFGTLDAETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIRVRKMNGLGYSKLELPGE
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgacgttacgcttcaagaacctcaacgcgctgcgcggtgaatggtttatc
gattttcgtcgtgaacccttcgccagcaacggcttatttgccattaccggcgcgaccggc
gcgggtaaaaccaccttgctggatgccatttgcctggcgctctaccaccagacgccgcgc
cttggcgtgctgtcgcagacacaaaacgaactgattacgcgtgacactgccgaatgcctg
gcggaagtggaatttgagattaaaggcgaagcctggcgcgccttctggagccagaaccgc
gcgcgtggccaggccgatggcaaattgcaggcaccgcgcgtcgagctggcgcgcgtggcg
gataaccagattgtggccgataaggtcggtgacaaactcaagctcatcgaaacactttcc
ggcctcgattttgatcgttttacccgttcaatgatgctgtcgcagggtcagttcgctgcc
ttccttaacgccaaaccgggcgagcgtgccgaactgctggaagagctgaccggcacagag
atttacggccagatttcgatgcagatttacgaacgctggcgtaccgcacgcagcaatctg
gagacattgcgcgcgcgcgctggcggcatgatgttgctggatgaggggcgtcgcacagaa
ctgatgcagcaagttgaagcgttaacggctcaggaaaaaatgctgagcgatcagcttgag
caggcgcaacaacagcaacagtggctgacacaatctcaccaactgacgcaggagcaacag
caagccgaacaggctaaccaggatgccgagcaggcatggcaacaggcggagagcgatcgc
cagcgcctggcacgtgcggaaccggctgagaagctgcgagaaaaacttcagcagcgtgag
caattgcaacaagatcaacagctcgccacccagcaggcaaagcagttgcacacgcagcag
caagatgcgcaaaccacactgcagcagggtgaaaaaagctatcacacggcacagcaggcg
cgtgagcaggcactcgccgaccagcaacagctggaaaccttgctcaccgaacaagtgatt
ccgctcgatcaacagatcgccagccgtgcagagcaattgactgagcagcagcgcctgcat
gcgcagcagtcactgacagtgcagcaaagccaaaacgcgctcaatcagcatcagctaacc
cgtgagcgcttacagcagcaactggcagaacaacagacatttcgcaaccgtgaagcggca
gtggcgctctgggggccagagctgacgcgctggcaggccgatatcgctcgtttcgatgaa
cgcgaacaggcgctaacgcaacttcgtgcacaacagcaacagcaaaacgcactgctgaca
cagcagcagcaggcgattgccgaaggtgatcgcgcgttgcaacctttgcagcacgctgag
gcgcaggccagccagcaacgtcagcaagcggagcaggcactcacttcacttgaagccgcc
atcaacagcactgcgctgcgtgccgcgctgacccagcatcaacatcagcgcgcgccacgc
caccagctcagcttattggcggcgcgctggcagtcgttgcagccgcagttgcaactgcgg
caacaaaaacgggcacagttacaacaacagcatcagcgcgatgaacaggccttgcaggcg
ctgcgcgaggactacaagcgtgagcatcaggcactgctggatattcgcaaaatctgcgag
ctggagcgcaccatcgcacagctggctgatgaacgcgcccggctgcagcccgagcagccc
tgcccactgtgcggctcatgccagcatccggcgattgagcagtatcagcaattacaaccg
ggcgaaaaccagcaacgactggcggcgcaggaagcgctggtcagtaagcttaaagagtcg
ggcaccgcgaaaagtgagcagcaaaagctcgcattgcaacagcagcaggtgctgcaacag
gagatcaccgaattcgagcagcaactcgcggtcgcacgcgagcattggcaaggcctcagc
ggtgagctggcacttacctgcacgctggatcagcaagatgtctttacggcgtggcaacag
cagcaggatgagcaggaagcggcgcagcagcagcaactgcagcagcgcgaaaatgcggcg
cgagcgctgcaacaggccaaagatgcgcatctgttacagcaacagcagtggcaacagcgg
caaagcgcacaactgctggcacagcagcagctgaacaacctacagcaaacgcttgatgag
ctgaaccagcgtgaaacgcaggcacacagcgcctggcagcagttagcgcagcagctggaa
cagcagctggcggcacatcagtttgcgctgcccgatcgcgatggccgcgccagctggctg
gccacattgcagcagcgctggcaagcctggcagcagagtgagcgcttgctggccgaacta
cagccacagctggctacagccgacagcgagcagagcaacctgcaaaataatctgacgcgc
gagcagcagcagctggaggccttgcagcacgcgcttagcagcctgcaacagcaacatgca
gaacagcagcagcagcgccagcagctgtttggcgatcgccaggtgagcgccgcacgccag
cagcagcaggccacactgcaacagtgcgaacaagcgctggcacagcagttgcagcagtgg
cagcaggcacaaagccagctgcatagcctgaatggtcaatgtgagcagattgatagccaa
ctgcaagccatgcagctgcgcatacaggctgcggaaacggcgtttaacagcgcactccag
cacagccatttcatcgacgagcaggcattgcgcagcgcattgctggacgaacaggatatt
cagcatctgcgccagcatctgcaaacgctggagcaacagcgtcagcagcagatcgcgctg
cgccaacagctggcacagcgcgtcacagcccatcagcaacagcgccctgctgccttaagt
gacgaggtggcggcgggtctcgctgaacagctggaatcactgcgtgtggcactgcgtgac
aatgcccgccagcaaggtgaagcgcagcagcagctgcacagcgatgcccagcagcgtcaa
cagcagcaatcgttactcacgcagattgccaatgacgaggtacaactgacacaactgggt
cgcctgaatgatttaatcggttcagccaaaggcgataaattccgtcgcttcgcccagggc
ttgacgctcgatcatctggtatggctggcgaaccggcagctcgaccgtttgcacgggcgc
tacctcctgcaacgccgcgtcaccgacgagctggaattggaagtggtcgatacctggcag
gccgatgccacgcgcgatacccgcacgctgtcaggcggcgaaagtttccttgtcagcctc
gcgttggcactggcgctgtcagatctggtcagccataaaacgcgcattgaatcgctgttc
cttgatgaaggcttcggcacgctggacgctgaaacgctcgataccgcgctggacgccctc
gacgcactgaacgccagcggtaaaaccatcggcgtgatcagtcacgttgaagcaatgaaa
gagcgcatcccggtgcagatccgagtgcgtaagatgaatggactgggttacagcaagctg
gaactgccgggggaataa
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integrated database retrieval system
