Pantoea rwandensis: LH22_19010
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Entry
LH22_19010 CDS
T03331
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kln03021
]
LH22_19010
Transcription machinery [BR:
kln03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LH22_19010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Helicase_RecD
Stereocilin
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AIR87447
LinkDB
All DBs
Position
4023218..4026124
Genome browser
AA seq
968 aa
AA seq
DB search
MVFTLGQRWISDTESELGLGTVVAIDTRMITMMFPATGENRLYARNDAPVTRVIFNPGDT
ITNHEGWQMSVDEVRNDNELMTYIGTRLDTEESGVVMREVMLDSKLVFSKPQDRLFAGQL
DRMDRFSLRFRARKYQSEQYRLPISGLRGMRTNLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMIIQQQLLAGRADRVLIVVPETLQHQWLVEMLRRFNLRFALFDDDRYTEAQH
DSDNAFETEQLIICSLDFVRRNKQRLELLADADWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEKTPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFSQFVAEQQNYRPVADAVSSLL
ADQAITKEEMNLINDLIGEQDIEPLLQVANSDRDGKEDARKELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHQIRLPLPAQYQTAIKVSGIMGTRKSAEERARDMLYPEKIYQEFEGD
SGTWWNFDPRVEWLMGYLTSNRKEKVLVICAQAATALQLEQVLREREGIRAAVFHEGLSI
LERDRAAAFFASEEEGAQVLLCSEIGSEGRNFQFASRLVMFDLPFNPDLLEQRIGRLDRI
GQMHDIQILVPWLEKTAQAVLLRWYHEGLDAFEHTCPTGRTIYDSEYSKLIEYLAAPENP
QGLDEFIAESRKQHDTLKSQLEQGRDRLLELNSNGGEAAQALANAIGEQDNDTDLVNFAL
NLFDIVGINQEDRSDSLIVLTPSDHMLVPDFPGLPEDGCTVTFNRNQALSREDTQFITWE
HPLIRNGLDLILSGDTGSCALSLLKNKALPVGTLLVEMVYVVEAQAPKSLQLTRFLPPTP
VRLLMDRAGNNLAGKVEFESFNRQLNAVNRHTGSKLVNAVQQEVHEILTQAEKVVIPEAQ
AIIAAAKVEADEKLSAELSRLEALRAVNPNIRDDEVEALESNREQVLASLGDAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtttttacactgggtcagcgctggattagtgatacggaaagtgaactgggattagga
acggtggtggcgattgatacccgcatgatcaccatgatgttcccggcaaccggcgaaaac
cgcctgtatgcccgtaatgatgctcccgtcacccgtgtgattttcaatccgggcgacacc
atcaccaaccacgaaggttggcagatgagcgtcgatgaagtccgcaacgataacgaatta
atgacttacatcggcacgcgtctcgacaccgaagaaagcggcgtggtgatgcgcgaagtg
atgctggacagcaaactggtattcagtaagcctcaggatcgcctgttcgccggtcagctc
gaccgtatggaccgtttctccctgcgcttccgtgcgcgtaaataccagagcgagcagtat
cgcctgccgatcagcggtctgcgtggcatgcgcaccaacctgattccgcatcagctgcat
atcgcccatgatgtcggccgccgtcatgcgccacgcgtgttgctggcggatgaagtgggc
ctgggcaaaaccattgaagccgggatgatcattcagcaacagctgctggctggtcgtgcc
gatcgcgtactgatcgtggtgccggaaacgctccagcaccagtggctggtagagatgttg
cgccgcttcaacctgcgctttgccctgtttgatgacgaccgctacaccgaagcccagcat
gacagtgataacgccttcgaaaccgagcagttaattatctgctcgctagacttcgtgcgt
cgcaataagcagcgtttggaattactcgctgatgccgactgggatttactggtggtcgat
gaagctcaccatctggcctggagcgaagaggcacccagccgtgaatatcaggtaattgaa
cagctggcggaaaaaacgcctggcgtattgctgctgacggcaacgccggaacagctgggc
ctggaaagtcactttgcccgtttacgtctgctcgatccaaaccgcttccacgacttcagc
cagtttgtggctgagcagcagaattatcgcccggtggctgatgccgtcagctcattgctg
gccgatcaggcgatcaccaaagaagagatgaacctgatcaatgacctgatcggcgagcag
gacatcgagccgctgctgcaggtggcgaacagcgatcgtgatggcaaagaagatgcgcgc
aaagagctggtctcgatgttgatggatcgccacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtgaagggcttcccgaaacgcgaactgcaccagattcgtttgccgctg
cccgcgcagtatcaaaccgcgattaaagtttccggcattatgggcacgcgtaagagcgca
gaagaacgcgcacgtgacatgctgtatccggaaaagatttatcaggaatttgaaggcgat
agcggtacctggtggaacttcgacccacgcgtagaatggctgatgggctacctgaccagc
aaccgtaaagagaaagtgctggtgatttgcgctcaggccgccactgcgctgcaactggaa
caggtgctgcgtgagcgtgaaggtattcgtgccgcggtgttccatgaaggattatccatt
ctggagcgtgaccgtgctgcggcatttttcgcttcagaagaagaaggtgcgcaggtgctg
ctgtgctcggagatcggttctgaaggccgcaacttccagttcgccagccgcctggtgatg
ttcgacctgccgtttaacccggacctgctggaacagcgtattggtcgtcttgaccgtatt
ggccagatgcacgacatccagattctggtgccgtggctggaaaaaaccgcccaggcggtg
ctgctgcgctggtatcacgaaggcctggatgcgtttgaacatacctgcccgactggccgc
accatctatgacagcgaatacagcaagctgattgaatacctcgccgcgccagagaatccg
caagggctcgacgagttcattgcagagagtcgcaaacagcacgacacgctgaaatcgcag
ttggaacagggtcgtgaccgtttgcttgagctgaactccaacggcggcgaagcggcgcaa
gcgctggcgaacgctatcggtgaacaggataacgacactgatctggtcaacttcgcactg
aatctgttcgatatcgtcggtatcaatcaggaagatcgcagtgacagcctgatcgtgcta
acgccatccgatcatatgctggtgccggatttcccaggtttgccggaagacggctgcacc
gtgactttcaaccgcaaccaggcgctatcgcgcgaagacacccaattcatcacctgggaa
catccgctgatccgtaatggtctcgatttgatcctgtccggtgataccggcagctgtgca
ttatcactgttgaaaaacaaagcgctgccggtgggtacgctgctggttgagatggtctat
gtggttgaagcgcaggcaccgaaaagcctgcaactcacccgcttcctgccgccaacgccg
gtgcgtttgctgatggatcgtgctggcaacaacctggcaggcaaagtggagtttgaaagc
tttaaccgccagttaaatgccgtgaatcgccataccggtagcaaactggttaacgcagtg
cagcaggaagtgcacgagattctgacgcaggccgaaaaagtggtgattccggaagcacag
gcgatcatcgcagcggcgaaagtcgaggcggatgagaagctgagtgccgagttgtcacgt
cttgaagcgctgcgagcggtcaaccccaacatccgcgatgatgaagttgaagcgctggaa
agcaatcgcgaacaggtgctggcaagcctcggtgatgcgggctggcgtctggacgcgctg
cgtctgattgttgtcacgcaccaataa
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