Pantoea rwandensis: LH22_19280
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Entry
LH22_19280 CDS
T03331
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kln03400
]
LH22_19280
DNA repair and recombination proteins [BR:
kln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LH22_19280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
RecA
AAA_22
GvpD_P-loop
SLFN-g3_helicase
AAA_14
NTPase_1
AAA
ABC_tran
Rad51
nSTAND3
AAA_24
AAA_16
NACHT
cobW
AAA_30
Zeta_toxin
AAA_29
Viral_helicase1
AAA_5
DZR
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AIR87501
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All DBs
Position
complement(4092981..4094363)
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AA seq
460 aa
AA seq
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MAKAAKRAFVCNECGADYPRWQGQCSACNAWNTITEVRIAASPAAARNERLSGYAGSAGP
SRVQKLSEISLEAVPRFSTSFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQVMCKLS
EGMKTLYVTGEESLQQVAMRAHRLGLPTENLNMLSETSIEQICLIAEQEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VMLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGMREISNPSAIFLSRGDEVTSGSSV
MVVWEGSRPLLVEIQALVDHSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVIFGEVGLAGEIRPVPSGQERISEAA
KHGFKRAIVPAGNAPKKAIDGMKVYSAKKLADALAILDEL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaagcggcaaaacgcgccttcgtttgtaacgagtgcggcgcagattatccacgc
tggcaggggcaatgtagcgcctgcaacgcgtggaacaccatcaccgaggtgcgtattgcc
gcctcgcctgcggcagcgcgtaacgagcgtctgagtggctatgccggtagcgcgggaccc
agccgggtgcagaagctgtccgaaatcagcctcgaagccgtgccgcgtttctccaccagc
ttcaaagagtttgatcgcgtgctgggcggcggcgtggtgccaggcagcgcgatactgatc
ggtggtaatccgggagccggtaaatcgacgctgctgttgcaggtgatgtgcaagctgtcc
gaagggatgaaaaccctgtatgtcaccggtgaagagtcactgcaacaggtcgcaatgcgc
gcccatcgtctgggattacccactgaaaacctgaatatgttgtcggaaaccagtatcgag
cagatctgtctgatcgccgagcaggaacagccgaaactgatggtaatcgactccatccag
gtgatgcacatggcggatatccagtcttcgcctgggagcgtagcgcaggtgcgtgaaacg
gccgcttacctgacgcgcttcgctaaaacacgcggcgtagcgattgtgatggtcggccac
gtcaccaaagatggctcgctggccgggccaaaagtgctggaacactgcatcgactgttca
gtgatgctggatggcgatgccgattcccgtttccgcacgctgcgcagtcacaaaaaccgc
ttcggtgcggtgaacgaattgggcgtgtttgccatgaccgagcagggcatgcgtgaaatc
agcaacccgtcagccattttcctgtcacgcggcgatgaagtcacctctggcagttcggtc
atggtggtgtgggaaggttcgcgcccgctgctggtggagattcaggcgctggtggatcac
tcaatgatgggcaacccgcgtcgtgtcgcagttggcctggagcaaaaccgtctggcgatt
ttgctggctgttctgcaccggcacggtggtttacaaatggcggatcaggatgtgttcgtc
aatgtggtcggtggtgtgaaagtcaccgaaaccagtgctgacctcgcgctgctgctggcg
atggtatcgagcttgcgtgaccgcccactgccgcaggatttggtgatcttcggtgaagta
gggctggccggtgaaattcgtccggtgcccagcggtcaagagcgcatttccgaagccgcc
aagcacggtttcaagcgcgcgattgtgccggcgggcaatgcaccgaaaaaggccatcgac
ggcatgaaagtgtacagcgccaagaagctggcggatgcactggcgatattggacgagctg
taa
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