Klebsiella sp. MPUS7: GUC22_02835
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Entry
GUC22_02835 CDS
T10508
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
klp Klebsiella sp. MPUS7
Pathway
klp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
klp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUC22_02835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klp03019
]
GUC22_02835
03009 Ribosome biogenesis [BR:
klp03009
]
GUC22_02835
Enzymes [BR:
klp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUC22_02835
Messenger RNA biogenesis [BR:
klp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GUC22_02835
Ribosome biogenesis [BR:
klp03009
]
Prokaryotic type
rRNA helicases
GUC22_02835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_22
DRTGG
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QHI85896
LinkDB
All DBs
Position
590219..592180
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AA seq
653 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELRAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD
VETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERSGE
DRPKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPERSGERRGGGERREGGRSFGGGERRE
GRGFGGERREGGRSEGRRFSGERREGGRAPRRDDASAPRRDDSAGRRRFGGDA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcccatccttgaagcg
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctg
ctgggcggccgcgacgttctgggtatggcccagacgggtagcggtaaaaccgcagcgttc
tctttaccgctgctgaacaaccttgatcctgagctgagagcaccgcagattctggtgctg
gcgccgacccgcgaactggcggtacaggtagctgaagcaatgacggatttctctaaacat
atgcgcggcgtaaacgtggttgccctctacggcggccagcgttatgacgtgcagctgcgc
gcgctgcgtcagggaccgcaaattgttgttggtaccccgggtcgtctgctggaccacctg
aaacgcggtacgctggatctctctaagctgagcggtctggttctggatgaagctgacgaa
atgctgcgcatgggcttcatcgaagacgtagaaacgattatggcgcagatcccggaaggt
catcagaccgctctgttctccgccaccatgccggaagcgattcgtcgtattacccgccgc
tttatgaaagagccgcaggaagtgcgcatccagtcgagcgtaacgactcgtccggacatc
agccagagctactggactgcttacggtatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggccgaagcgctggagcgtagcggctatagcagcgctgcgctgaacggcgatatgaac
cagtccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtagttaactac
gatatcccgatggattccgagtcttatgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggtcgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgtacgatgaagctgaccattccggaagttgaactgccgaacgcagaactgctgggc
aaacgtcgcctggaaaaatttgccgcgaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgcgcgctgctggcgaaaatccagccgtctgccgaaggcgaagagctggat
gtggaaacactggccgccgcgctgctgaaaatggctcagggcgaacgtccgctgatcctg
ccgccggatgcgccaatgcgtcctaagcgcgagttccgcgaccgtgacgatcgttttgag
cgtcgtggcgaccgtaacgaccgtggcccgcgcggcgaccgtcctgaacgcagcggcgaa
gatcgtcctaagcgtgaacgtcgtgacgttggcgatatggaactgtaccgcattgaagtg
ggccgtgatgacggcgttgaagtacgtcatatcgttggcgcaatcgccaacgaaggcgac
atcagcagccgttacattggtaacatcaagctgtttggttctcactccactatcgaactg
ccgaaaggcatgccgggcgaagtgctgcagcactttacgcgtacccgcatcctgaacaag
ccgatgaacatgcagctgctgggtgatgctcagccgcgtcctgagcgcagcggcgaacgt
cgtggcggcggtgagcgtcgtgaaggcggtcgtagcttcggcggcggtgaacgtcgtgaa
ggtcgtggtttcggcggcgagcgtcgcgaaggcggccgtagtgaaggtcgtcgtttcagc
ggcgaacgtcgtgaaggcggccgcgcgccgcgccgcgatgatgcttcagctccgcgtcgc
gatgactccgcaggtcgtcgtcgtttcggtggcgatgcataa
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