Klebsiella sp. MPUS7: GUC22_16240
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Entry
GUC22_16240 CDS
T10508
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
klp Klebsiella sp. MPUS7
Pathway
klp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
klp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUC22_16240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klp03019
]
GUC22_16240
03009 Ribosome biogenesis [BR:
klp03009
]
GUC22_16240
Enzymes [BR:
klp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
GUC22_16240
Messenger RNA biogenesis [BR:
klp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GUC22_16240
Ribosome biogenesis [BR:
klp03009
]
Prokaryotic type
rRNA processing factors
GUC22_16240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Motif
Other DBs
NCBI-ProteinID:
QHI88366
LinkDB
All DBs
Position
3471219..3474467
Genome browser
AA seq
1082 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNSHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAENRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIETRQTDVRVIIVPNDQME
TPHYSVLRVRKGEETSTLSYLLPKLHEEEMAMPSDEEPAERKLPEQPALAAFVMPEAPPA
PAQEEPTRATATVTPAASAPKAAAPAQPGLIARFFSALKNMFSGAEETKPAEVQVEKKAE
EKSERQQERRKPRSNNRRDRNDRRDNRDNRDSRDNRDSRAENSEGRESREENRRNRREKQ
QNAEPREIRQTTVEDSEKGKARDEQQPRRERNRRRNDDKRQVPQEAKTQTREEPIVQDSE
QEERVQTMPRRKPRQLAQKVRFESAAAEQVVEPVAAAQVTEAPVVQPETVAPRTELAKVD
LPAVVEAAAEHDDNGEARESNGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVA
CASPEMASGKVWIRYPVVRPQDQQQEDAPVQEFSVAAAEPIITPAAAAEPVVSEVIAPAA
AEDSAAISEPVAVINEPEVPVVETTHPEAIATPVDEQPQLIAKADEAVVEDVVAEAVEVD
AKDAVEPEATAPVSEPVVAEPAAAEEAPEVVEEAPVVSAPAPVAEPVVEAKPAVEAAPVV
KVANRHATAPMTRAPAPDYVPEAPRQSDWVRPNFDFDGKGSAGGHSATHKATAGPTRPQS
VE
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcagcaggaagagttgcgcgtcgcccttgttgat
gggcagcgcctgtacgacctggatatcgaaagccccgggcacgaacagaaaaaagcgaac
atctacaaaggcaaaatcactcgtatagaacctagcctcgaagccgcgtttgttgattat
ggtgccgagcgtcatggtttcctccctcttaaagaaatcgcccgcgaatacttccctgcc
aactacaattctcatggtcgtccgaacatcaaggacgtgctgcgtgaaggtcaggaagtt
attgtccagattgataaagaagagcgtggcaataaaggcgccgcgctgacgacctttatt
agcctggcgggcagctatctggtgctgatgccgaataacccacgcgctggcggtatttca
cgccgcatcgagggtgacgatcgcaccgaacttaaagaagcgctggccagccttgagctg
ccggacggcatgggacttatcgttcgcaccgccggcgtcggcaagtccgccgaagcgctg
cagtgggacttaagcttccgcctgaagcattgggaagccatccagaaagccgcagaaaat
cgccctgctccgttcctgatccatcaggaaagcaacgtgattgtgcgcgcgttccgcgac
tatctgcgccaggatatcggcgaaattctgattgataacccgaaagtgcttgagctggct
cgccagcacatcgcggcgctgggtcgtccggattttagcagcaaaattaagctgtacacc
ggggaaatcccgctgttcagccactatcaaatcgaatcgcagattgaatccgctttccag
cgtgaagtgcgtctgccttccggcggttctatcgttatcgacagcaccgaagcgctgacc
gctatcgatatcaactccgcacgcgccacccgcggcggcgacatcgaagaaacggcgttt
aacaccaacctggaagcggcagatgaaatcgctcgtcagctgcgtctgcgcgaccttggc
ggcctgatcgttatcgacttcatcgatatgaccccggttcgccatcagcgtgcggtggaa
aaccgcctgcgcgaagccgtccgtcaggaccgagcgcggatccagatcagccatatttca
cgctttggactgctggagatgtcgcgccagcgcctgagcccgtcgctcggcgagtccagc
catcatgtctgcccgcgctgtagcggaacgggtaccgtgcgcgataacgaatcgctgtcg
ctttccattctgcgtttgattgaagaagaagcgctgaaagagaacaccaaagaagttcac
gctatcgtgccggtgccgattgcctcttacctgctgaacgaaaaacgtgctgcggtaagc
gcgattgaaacccgtcagaccgatgtgcgcgtcattatcgtgccaaacgaccagatggaa
acgccgcactactccgttctgcgcgtgcgtaaaggcgaagaaacctccacgctgagctat
ctgctgccgaaactgcacgaagaagagatggccatgccttctgatgaagagccggccgag
cgtaagcttccggaacaaccggcgctggccgcttttgtcatgcctgaagcccctccggct
ccggcacaggaagagccgacgagggcaacagctaccgttacgcctgccgcatccgcaccg
aaggccgcagcgccggcccagcctggtctgattgcccgcttcttcagcgccctgaaaaat
atgttctccggcgcggaagagactaaaccggcagaagttcaggttgagaaaaaagcggaa
gagaaatccgaacgtcagcaggagcgtcgtaaaccgcgttctaacaaccgccgcgatcgc
aatgaccgtcgtgacaaccgggataatcgcgatagtcgtgataaccgtgatagtcgtgcc
gagaatagcgaaggccgggagtctcgcgaagaaaaccgccgtaaccgtcgtgagaagcag
cagaacgccgagccgcgcgaaattcgccagaccacggtagaagatagcgaaaaaggcaaa
gctcgcgacgagcagcagccgcgccgcgaacgtaatcgtcgtcgtaacgatgataaacgt
caggttccgcaggaagccaaaacgcaaacccgtgaagagccaatcgtacaggatagcgag
caggaagaacgcgtccagactatgccgcgtcgtaaaccgcgtcagctggcgcagaaggtt
cgtttcgaatcggctgccgctgagcaggttgtcgagccggtagccgcagcgcaggtaacc
gaagcgcctgtcgtccagccggaaaccgttgctccacgtactgaactggcaaaagtcgat
ctgccggcggtcgttgaggcagctgcggaacatgacgacaacggtgaagcccgcgaatct
aacggcatgccgcgccgttcgcgtcgctcgcctcgtcacctgcgcgtaagcggccagcgc
cgtcgtcgctaccgtgatgagcgttacccgacgcaatccccgatgccgctgaccgttgcc
tgcgcatcgccggaaatggcgtctggcaaagtgtggatccgctatccggtggttcgtccg
caggaccagcagcaggaagacgctccggttcaggagttctccgtcgctgcggctgagccg
atcattacgccagcggctgccgccgagccggttgtttctgaagtcattgcgccagcagca
gccgaagatagcgcagccatctccgaacctgtggcggtgattaacgaaccggaagtcccg
gtcgttgaaactacccatccggaagctatcgccaccccggttgatgaacagccgcagctg
attgcaaaagccgatgaagccgtagtcgaagacgttgtcgcagaagccgtcgaagttgat
gcgaaagacgccgtcgagccggaagcaacggcccctgtgtctgaacccgttgtagccgaa
cctgctgcagccgaagaagcgcctgaggttgttgaagaagcgcctgtcgtttccgcgcca
gcgccagtagcggagccggtggttgaggctaagccagctgtcgaagccgcgccggtagtt
aaggtcgccaatcgtcacgcgacggcgccgatgacgcgtgcgcctgcaccagactacgtg
cccgaagcgccgcgtcaaagcgattgggttcgcccgaactttgattttgacggtaaaggc
tctgctggcggccatagcgccacgcataaagccactgccggacctacccgtccgcagtcc
gtagagtaa
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