Kluyvera sp. CRP: K7B04_07670
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Entry
K7B04_07670 CDS
T08589
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
klu
Kluyvera sp. CRP
Brite
KEGG Orthology (KO) [BR:
klu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klu03019
]
K7B04_07670 (csrD)
Messenger RNA biogenesis [BR:
klu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K7B04_07670 (csrD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
UAK21740
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Position
1637134..1639074
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AA seq
646 aa
AA seq
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MRLTTKFSAFFTLLTGLTIFVTLIGSSLSFYNGIQYKIATRVQAVATVLDNRLVNSSFET
LDNQLDEIMVPLDIVRIDFTLNDKSLFHHTRSSSYLPMGSHYQYREITVASLKHPGMKIH
LVYLDPMANYFRSLMTTAPLTITIAFMVLVVFIAVRWLRRQLAGEELLEMRATRILNGER
GAKAKGNIHEWPARTSSALDTLLSEIQFAGEQRSRLDTLIRSYAAQDSKTGLSNRLFFDS
QLATLLDDQENVGAHGIVMMIRLPDFDFLRDNWGRAAAEEHVFTLINLLSTFIMRYPGAL
LARYRRSDFTVLLPHRTLKEADSIAGQLLKAIDGLPLAKILDRDDMMHIGICAWRSGQTT
EQVMEHAEAAVRNAVLQGSNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
SLDGTVHHRELMCRIFDGKEEVIAAEYLPMVLEFGLGEEYDRLQITRLLPFLSFWPQENL
AIQVTVESLIRPRFQRWLRDVLMQCEKSHRRRIIFELAEVDVCQHMTRLQPVVRLIHALG
VRVAVTQAGLALVSTSWIKQLEIELIKIDPVLVRDIEKRSQNQLLVQSLVEACKGTSIQV
FAAGVRSRGEWQVLTECGVFGGQGDFFASSQPLDANVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagccttttttacgctcttaaccgggcttaccatcttt
gtgacgttaattggctcctcactgagtttctataacggcatacagtataagatagccacg
cgcgtgcaggccgtcgcgaccgtgctggataatcgactggtcaacagctcgtttgagacg
ctcgacaaccagctcgatgaaatcatggtgccgctcgacatcgtgcgtatcgactttacc
ctgaacgacaaatcactgttccaccatacccgcagcagtagttatctgccgatgggcagc
cactatcagtatcgcgaaatcacggtggcgtcgctcaaacatcccggcatgaagattcat
ctggtgtatctggacccgatggccaactatttccgctcgctgatgactaccgcgccgttg
accatcacgattgcctttatggtgctggtggtctttattgccgtgcgctggctgcgacgc
cagctggcgggtgaagagctgctggagatgcgcgccacgcggatccttaacggcgagcgc
ggcgcgaaggcgaaggggaatattcacgaatggccggcacgtaccagctcggcgctggat
acgctgctgtcggagattcagtttgccggcgagcagcgcagtcgtctggatacgctgatt
cgctcttatgccgcgcaggattcaaaaaccggcctgagcaaccgtctgtttttcgatagc
cagttggcgacgctgctcgacgaccaggaaaacgtgggggcgcacggcatcgtcatgatg
atccgcctgccggatttcgactttttgcgcgacaactggggccgcgcggcggcggaagaa
cacgtttttaccctgattaacctgctctccacctttattatgcgctaccccggcgcgtta
ctggcgcgctaccgccgcagcgactttaccgttctgttgccgcaccgcacgctaaaagag
gccgacagtattgccgggcagctcttaaaagccatcgacggtctgccgctggcaaaaatt
ctcgatcgcgatgacatgatgcatatcggcatttgcgcctggcgcagcgggcaaaccacc
gagcaggtgatggaacacgccgaagcggcggtgcgtaatgctgtattgcagggcagtaac
agctgggccatttatgatgattcactaccggagaaagggcgcggcaacgtgcgctggcgc
accctgattgagcaaatgctcagtcgcggcggcccgcgtttgtatcaaaagccggccgtg
agtcttgacggcaccgtgcatcatcgagagctgatgtgccggatcttcgacggtaaagaa
gaggtcattgccgctgagtatctgccgatggtgctggagttcggactgggcgaagagtac
gaccgtttacagattacccgtctgcttcctttcctcagcttctggccgcaagaaaacctg
gcgattcaggttaccgtagagtcattgatccgcccgcgttttcaacgctggttacgtgat
gtattaatgcagtgcgaaaaatcgcatcgtcgacggattatttttgaacttgcagaggta
gatgtctgtcaacatatgacgcgtctccagcccgtcgttcgtttaattcatgcgttaggc
gttcgggtcgcggtgacgcaggcaggtttagcccttgtcagcaccagttggattaagcag
cttgagattgaactgattaagatcgatccggtgctggtacgtgatatagaaaagcgcagc
cagaaccagctgctggtacaaagcctggtagaggcctgtaaaggaacatcaatacaggta
tttgccgccggtgtacgcagccgcggtgaatggcaggtgctgacagaatgcggagttttc
ggcggccagggagatttttttgcctcttcccagccacttgacgcaaatgtgaaaaaatat
tcgcaaagatattcggtttga
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