KEGG   Kluyvera sp. CRP: K7B04_07670
Entry
K7B04_07670       CDS       T08589                                 
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
klu  Kluyvera sp. CRP
Brite
KEGG Orthology (KO) [BR:klu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:klu03019]
    K7B04_07670 (csrD)
Messenger RNA biogenesis [BR:klu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     K7B04_07670 (csrD)
SSDB
Motif
Pfam: EAL GGDEF GAPES4 GDPD
Other DBs
NCBI-ProteinID: UAK21740
LinkDB
Position
1637134..1639074
AA seq 646 aa
MRLTTKFSAFFTLLTGLTIFVTLIGSSLSFYNGIQYKIATRVQAVATVLDNRLVNSSFET
LDNQLDEIMVPLDIVRIDFTLNDKSLFHHTRSSSYLPMGSHYQYREITVASLKHPGMKIH
LVYLDPMANYFRSLMTTAPLTITIAFMVLVVFIAVRWLRRQLAGEELLEMRATRILNGER
GAKAKGNIHEWPARTSSALDTLLSEIQFAGEQRSRLDTLIRSYAAQDSKTGLSNRLFFDS
QLATLLDDQENVGAHGIVMMIRLPDFDFLRDNWGRAAAEEHVFTLINLLSTFIMRYPGAL
LARYRRSDFTVLLPHRTLKEADSIAGQLLKAIDGLPLAKILDRDDMMHIGICAWRSGQTT
EQVMEHAEAAVRNAVLQGSNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
SLDGTVHHRELMCRIFDGKEEVIAAEYLPMVLEFGLGEEYDRLQITRLLPFLSFWPQENL
AIQVTVESLIRPRFQRWLRDVLMQCEKSHRRRIIFELAEVDVCQHMTRLQPVVRLIHALG
VRVAVTQAGLALVSTSWIKQLEIELIKIDPVLVRDIEKRSQNQLLVQSLVEACKGTSIQV
FAAGVRSRGEWQVLTECGVFGGQGDFFASSQPLDANVKKYSQRYSV
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgcgattaacgacgaagttctcagccttttttacgctcttaaccgggcttaccatcttt
gtgacgttaattggctcctcactgagtttctataacggcatacagtataagatagccacg
cgcgtgcaggccgtcgcgaccgtgctggataatcgactggtcaacagctcgtttgagacg
ctcgacaaccagctcgatgaaatcatggtgccgctcgacatcgtgcgtatcgactttacc
ctgaacgacaaatcactgttccaccatacccgcagcagtagttatctgccgatgggcagc
cactatcagtatcgcgaaatcacggtggcgtcgctcaaacatcccggcatgaagattcat
ctggtgtatctggacccgatggccaactatttccgctcgctgatgactaccgcgccgttg
accatcacgattgcctttatggtgctggtggtctttattgccgtgcgctggctgcgacgc
cagctggcgggtgaagagctgctggagatgcgcgccacgcggatccttaacggcgagcgc
ggcgcgaaggcgaaggggaatattcacgaatggccggcacgtaccagctcggcgctggat
acgctgctgtcggagattcagtttgccggcgagcagcgcagtcgtctggatacgctgatt
cgctcttatgccgcgcaggattcaaaaaccggcctgagcaaccgtctgtttttcgatagc
cagttggcgacgctgctcgacgaccaggaaaacgtgggggcgcacggcatcgtcatgatg
atccgcctgccggatttcgactttttgcgcgacaactggggccgcgcggcggcggaagaa
cacgtttttaccctgattaacctgctctccacctttattatgcgctaccccggcgcgtta
ctggcgcgctaccgccgcagcgactttaccgttctgttgccgcaccgcacgctaaaagag
gccgacagtattgccgggcagctcttaaaagccatcgacggtctgccgctggcaaaaatt
ctcgatcgcgatgacatgatgcatatcggcatttgcgcctggcgcagcgggcaaaccacc
gagcaggtgatggaacacgccgaagcggcggtgcgtaatgctgtattgcagggcagtaac
agctgggccatttatgatgattcactaccggagaaagggcgcggcaacgtgcgctggcgc
accctgattgagcaaatgctcagtcgcggcggcccgcgtttgtatcaaaagccggccgtg
agtcttgacggcaccgtgcatcatcgagagctgatgtgccggatcttcgacggtaaagaa
gaggtcattgccgctgagtatctgccgatggtgctggagttcggactgggcgaagagtac
gaccgtttacagattacccgtctgcttcctttcctcagcttctggccgcaagaaaacctg
gcgattcaggttaccgtagagtcattgatccgcccgcgttttcaacgctggttacgtgat
gtattaatgcagtgcgaaaaatcgcatcgtcgacggattatttttgaacttgcagaggta
gatgtctgtcaacatatgacgcgtctccagcccgtcgttcgtttaattcatgcgttaggc
gttcgggtcgcggtgacgcaggcaggtttagcccttgtcagcaccagttggattaagcag
cttgagattgaactgattaagatcgatccggtgctggtacgtgatatagaaaagcgcagc
cagaaccagctgctggtacaaagcctggtagaggcctgtaaaggaacatcaatacaggta
tttgccgccggtgtacgcagccgcggtgaatggcaggtgctgacagaatgcggagttttc
ggcggccagggagatttttttgcctcttcccagccacttgacgcaaatgtgaaaaaatat
tcgcaaagatattcggtttga

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