Kluyvera sp. CRP: K7B04_08080
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Entry
K7B04_08080 CDS
T08589
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
klu
Kluyvera sp. CRP
Pathway
klu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
klu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7B04_08080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klu03019
]
K7B04_08080
03009 Ribosome biogenesis [BR:
klu03009
]
K7B04_08080
Enzymes [BR:
klu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K7B04_08080
Messenger RNA biogenesis [BR:
klu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K7B04_08080
Ribosome biogenesis [BR:
klu03009
]
Prokaryotic type
rRNA helicases
K7B04_08080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_22
DRTGG
Motif
Other DBs
NCBI-ProteinID:
UAK21819
LinkDB
All DBs
Position
1722630..1724576
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AA seq
648 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDLYRGLLAKIQPTAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRDRGDREDRP
KRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKG
MPGEVLQHFTRTRILNKPMNMQLIGDAQPRPERSGRSFGGERREGGRSFGGERREGGRSF
GGERREGGRGDGRRFSGERREGSRGPRRDDAAPRRDDSAGRRRFGGDA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaacggcggcgttc
tctctgccgctgctgaacaatcttgatcctgagctgaaagcgccacagattctggtgctg
gcaccgacccgcgaactggcggttcaggtggctgaagcaatgacggatttctctaaacat
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcagctgcgc
gccctgcgtcaagggccgcaaatcgttgtcggtaccccgggtcgtctactggaccacctg
aagcgcggcaccctggacctctctaagctgagcggcctggtgctggatgaagcagatgaa
atgctgcgcatgggctttatcgaagacgttgaaactatcatggcgcagatcccggaaggt
catcagaccgcgctgttctccgccaccatgccggaagcgattcgtcgtattacccgtcgc
tttatgaaagagccgcaggaagtacgcattcagtccagcgtcaccactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgtaagaatgaagcgctggtgcgtttcctg
gaagcggaagactttgatgcggcgattatcttcgtacgtaccaaaaacgcgaccctggaa
gtagcagaagcgctggagcgcaatggctacaacagcgctgcgctgaacggtgatatgaac
caggccctgcgtgagcagactctggagcgtctgaaagatggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgtagaacgtatcagcctggttgtgaactat
gacatcccgatggactccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggc
cgtgcgggtcgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatc
gaacgcaccatgaagctgaccattccggaagtggaactgccgaacgcagaactgctgggc
aaacgccgtctggaaaaattcgcggcgaaagtacagcagcagctggaaagcagcgatctg
gatctgtaccgtggcctgctggctaaaattcagccgaccgcagaaggcgaagagctggat
atggaaacgctggccgctgcgctgctgaaaatggcacagggcgaacgttctctgatcgtt
ccgccagatgcgccgatgcgtccgaaacgtgagttccgtgaccgtgacgatcgctttgag
cgtcgtggcgatcgcaacgatcgtggtccgcgtgaccgtggcgaccgtgaagatcgtccg
aagcgcgaacgtcgtgacgttggcgatatggagctgtaccgcattgaagtgggccgtgat
gacggcgttgaagttcgtcatatcgtgggcgcgattgctaacgaaggcgatatcagcagc
cgttacatcggtaacatcaaactgttcggtacccactccaccatcgaactgccgaaaggc
atgccgggcgaagtactgcagcactttactcgtactcgcatcctgaacaagccgatgaac
atgcagctgatcggtgatgctcagccgcgcccagagcgtagcggtcgcagcttcggcggc
gaacgtcgtgaaggtggtcgtagcttcggcggtgagcgtcgtgaaggcggccgtagcttc
ggtggcgagcgtcgcgaaggtggccgtggcgatggtcgtcgtttcagcggcgaacgtcgt
gaaggcagccgtggcccgcgccgtgatgatgctgcgccgcgtcgtgacgactccgcaggt
cgtcgccgtttcggcggtgacgcataa
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