Kluyvera sp. CRP: K7B04_09925
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Entry
K7B04_09925 CDS
T08589
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
klu
Kluyvera sp. CRP
Brite
KEGG Orthology (KO) [BR:
klu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
klu03009
]
K7B04_09925 (rlmD)
Enzymes [BR:
klu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
K7B04_09925 (rlmD)
Ribosome biogenesis [BR:
klu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K7B04_09925 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
PCMT
RrnaAD
MTS
Methyltransf_11
Cons_hypoth95
Methyltransf_4
FtsJ
Methyltransf_23
Methyltransf_15
TPMT
PrmA
Methyltrans_SAM
Methyltr_RsmB-F
CMAS
Motif
Other DBs
NCBI-ProteinID:
UAK22162
LinkDB
All DBs
Position
2115252..2116550
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AA seq
432 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVTVSSLDPFGQGVARHNGKALFINGLLPEERAEITLTEDKKQ
YARGQVKRRLSDSPERVEPRCPHFGVCGGCQQQHASVALQQRSKRAALNRLMKREVEEVI
AGEAWGYRRRARLSLNYQPKTQRLQMGFRKANSNDIIDVVQCPVLVPNLEALLPAVRECL
SSLQGLRHLGHVELVSADNGPLMVLRHTAALNGEDKEKLERFSHSSGVALYLAPESEILE
RVTGDAPWYSSDGLRLTFSPRDFIQVNDGVNQQMVATALAWLDVQPTDRVLDLFCGMGNF
TLPLAKRAASVVGVEGVPALVAKGRENAELNHLQNVTFFHENLEDDVTLQAWAKHGFDKV
LLDPARAGAPGVMQHVIKLAPTRVVYVSCNPATLARDSEALLNAGYQIQRLAMLDMFPHT
GHQESMVLFERR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacggcgcgtgacgacgcgccagatcataaccgtgaca
gtcagcagtcttgatcctttcgggcaaggtgtggcgcgccacaacggtaaagcattattc
atcaatgggttattgccggaagagcgcgcggaaattaccctgacggaagacaaaaaacag
tacgcgcgcgggcaggtaaaacgtcgtctgagcgacagcccggagcgcgttgaaccgcgc
tgcccgcactttggcgtttgcggtggctgccagcagcagcatgcgtcggttgcactacaa
cagcgcagcaaacgtgcggcgctgaatcgtttaatgaagcgcgaggtcgaggaggttatc
gccggggaagcctggggataccgccgccgcgcgcgcttaagcttgaattatcagccaaaa
acccaacgcttgcagatgggttttcgcaaggccaactcgaacgatatcatcgatgtggtg
caatgccctgttttggtgcccaatcttgaggcgttgctacccgctgtgcgtgaatgcctg
agcagcctgcaaggcctgcgtcatttggggcatgtggagctggtcagcgccgataacggg
ccgctgatggtgctacgccatacggcggcgcttaacggcgaagataaagaaaaactggaa
cgcttttcgcattcttccggcgtggcgctgtatctggcgccggaaagcgagatacttgaa
cgcgttaccggtgatgctccctggtattcctcagacgggctacgcttaaccttcagcccg
cgcgattttattcaggttaacgacggcgtaaatcagcagatggtggcgacggcgctggca
tggctggacgtgcagcctactgaccgggtgctggatctgttctgcggaatgggcaacttt
acgttaccgctggccaaacgcgcggccagcgtggtcggcgttgaaggcgtgcctgcgctg
gtggcgaaagggcgcgagaatgccgaactcaaccacctgcaaaatgtcaccttcttccac
gagaatctggaagatgatgtaacacttcaggcatgggcgaaacacggttttgacaaagtt
ttactcgatcctgctcgtgctggcgcaccgggcgtgatgcagcatgttataaaattagcg
ccgacgcgggtggtgtatgtctcctgcaatccggcgacgctggcgcgcgatagcgaggcg
ttgctgaatgcgggttaccaaattcagcgtctggcaatgctggatatgttcccgcacact
gggcaccaggaatctatggtgctgtttgagcgtaggtaa
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