Kluyvera sp. CRP: K7B04_15930
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Entry
K7B04_15930 CDS
T08589
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
klu
Kluyvera sp. CRP
Pathway
klu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
klu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K7B04_15930 (pdeR)
Enzymes [BR:
klu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
K7B04_15930 (pdeR)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_8
PAS_3
Motif
Other DBs
NCBI-ProteinID:
UAK18811
LinkDB
All DBs
Position
complement(3377788..3379773)
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AA seq
661 aa
AA seq
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MVKSLAQNLLDPNSSETSLYWRLSRAEPTLLLGTDPDANADFAVPLSDENASRIRAMSVT
TSSIALNIQLNGYDVPLHLIGRKVSGTEWAGTASSWFDTSSVARDLLQGLLFAEQVVSEA
NAVIVILDREGKIQRFNRLCEEYTGLKEQDVIGKTAFELFMSAPEAAAARENVSRFFTNG
GPYEVERWIKTRKGSRLFLFRNRFVHSGSGKNEIFLICSGTDITEERKAQERLRVLANTD
TITGLPNRHAINELIGRAMDNRQGDHQVGLVYFDLDNFKKVNDAYGHVFGDQLLQSVALS
ILSCLEDGQTLARLGGDEFIVLAVNTSQCALEAMASRVLTRLRDPFRIGLIEVYSGCSLG
ISLAPQHGEDRESLIRNADTAMYTAKEKGRGRFSVFSPEMNQRVFEYLWLDTNLRKALQS
DQLVIHYQPKVALNGEIQSLEALVRWNSPERGLIPPLDFISYAEESGLIVPLGRWVMLEA
IRQLAYWRDRGIHLRVAVNVSARQLVDQSIFSDLKQALKAQHFSECPIDIELTESCLIDN
ADQALEVIQQFRSLGAQIHLDDFGTGYSSLSQLARFPIDTIKLDHSFVHHVHKQSVSQSL
ALAIIAVARALNLRIIAEGVEDADDDAFLVQNGVDERQGYYFARPMPAAELERWLEARQG
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtctctggcacaaaatctgctcgacccaaactccagcgaaaccagcctctac
tggcgtttgtcgcgtgccgaaccgacgctgcttttagggacggatcccgatgcgaatgcc
gactttgccgttccgttaagtgacgaaaacgccagccgtattcgcgccatgagcgtcacc
acgtccagcatcgccctgaatattcagcttaacggctacgacgtccctctgcatttaatt
ggccgcaaggtcagtggtaccgaatgggccggtaccgcctcttcctggtttgatacctct
tccgtcgcccgcgatctgttacaaggcctgctgtttgccgaacaggtggtttcggaagcc
aacgccgtgatcgtcattctcgacagagaaggcaaaattcagcgcttcaaccgcttatgc
gaagagtataccggcctcaaagaacaggacgtcatcggcaaaacggcgttcgaattgttt
atgtcggccccggaagccgcagcggcgcgggaaaacgtcagccgtttttttaccaacggc
gggccgtatgaagttgagcgctggatcaaaacgcgtaaaggctcacgcctgtttttattt
cgcaaccgctttgtgcacagcggcagcggcaaaaacgagatctttctcatctgttccgga
accgatattaccgaggaacgcaaagcccaggaacgcctgcgggtgctggccaatactgac
accattactggcctgcccaatcggcacgcgatcaatgaactgattggccgcgcgatggat
aaccgtcagggcgaccatcaggtgggtcttgtctatttcgacctcgacaacttcaagaag
gtgaatgatgcctacggccacgtctttggcgaccagctgttgcagtctgtcgcgctgtcg
attttaagctgtctggaagacggccagacgctggcgcggctcggtggcgacgagtttatc
gtcctggcggtgaatacctcgcaatgcgcgctggaggcgatggcgtcacgggtgctgacc
cgcctacgcgatccttttcgtatcggcctgattgaggtctacagcggctgttcactcggc
atttcgctcgcaccgcagcacggggaagaccgtgagagcctgattcgcaatgccgacacc
gcgatgtacaccgcgaaagaaaaaggccgcggacgcttcagcgtcttttcccccgaaatg
aatcaacgagtgttcgaatatctgtggctggatactaacctgcgcaaagcgctgcaaagc
gatcaactggtcatccattatcagcccaaagtggcgctaaacggcgaaatccagagtctg
gaagcgctggtacgctggaattcgccggagcgcgggctaattccgccgctcgactttatc
tcttacgccgaagaatccgggctgattgtgccgctggggcgctgggtcatgcttgaagcc
attcgtcagttggcttactggcgagaccgcggtattcatctgcgcgtggccgtcaacgtt
tcggcgcgccagttggtcgatcaatccatttttagcgaccttaaacaggcgcttaaggct
caacacttttctgaatgcccgatagatattgagctgaccgaaagctgcctgatagataat
gctgaccaggctctggaggtcattcaacagtttcgctcgctcggcgcgcagattcacctc
gacgatttcggtaccggctattcgtcgctgtcgcagttggcgcgtttccccatagatact
atcaagctggaccatagttttgtgcatcatgtgcataaacagtcggtttcccagtcgctg
gcgctggcgattattgccgtcgcccgtgcgcttaatttgcgcattattgccgaaggggtg
gaggatgctgacgacgacgcattcctggtgcaaaatggcgttgacgagcggcaaggctac
tattttgcccgccctatgcccgctgccgaactggaacgctggctggaggcgcgtcagggg
ttataa
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