Klebsiella huaxiensis: DA718_03290
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Entry
DA718_03290 CDS
T05915
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
klw
Klebsiella huaxiensis
Pathway
klw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
klw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DA718_03290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klw03019
]
DA718_03290
03009 Ribosome biogenesis [BR:
klw03009
]
DA718_03290
Enzymes [BR:
klw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DA718_03290
Messenger RNA biogenesis [BR:
klw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DA718_03290
Ribosome biogenesis [BR:
klw03009
]
Prokaryotic type
rRNA helicases
DA718_03290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
QBG06273
LinkDB
All DBs
Position
679346..681313
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AA seq
655 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNNLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQSLREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD
VETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERSGE
DRPKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPERSGERRGGGERREGGRGFGGGERRE
SRGFGGERREGGRGDGRRFSGERRDGGNRAPRRDDAGAAPRRDDSAGRRRFGGDA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcccatccttgaagcg
cttaacaatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctt
ctgggcggccgtgacgttctgggtatggcccagacgggtagcggtaaaaccgcagcgttt
tctttaccgctgctgaacaaccttgatcctgagctgaaagcgccacagattctggtgctg
gcaccgacccgcgaactggcggtacaggtagccgaagcaatgacggatttttctaaacat
atgcgcggcgtaaacgtggttgccctttacggcggccagcgttatgacgtgcagctacgc
gcactgcgtcaggggccacaaatcgttgtcggtaccccaggtcgtctactggatcacctg
aaacgcggtacgctggatctctctaaactgagcggtctggtactggatgaagctgacgaa
atgctgcgcatgggctttatcgaagacgtagaaacgattatggcgcagatcccggaaggt
catcagaccgctctgttctccgccaccatgccggaagcgattcgtcgtattacccgccgc
tttatgaaagagccgcaggaagttcgcatccagtccagcgtcactactcgcccggacatc
agccagagctactggactgcttacggtatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattattttcgtgcgtaccaaaaacgcgaccctggaa
gtggccgaagcgctggagcgtagcggttataacagcgcagcgctgaacggtgacatgaac
cagtccctgcgcgagcagactctggaacgtctgaaagatggccgtctggatattctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgttaactac
gatatccctatggattcagaatcttacgttcaccgtattggtcgtaccggccgcgcgggt
cgcgcgggtcgtgctctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatt
gaacgcacaatgaagctgactattccagaagtcgaactgccgaacgcagagctgctgggc
aaacgtcgcctggaaaaatttgccgcgaaagttcagcagcagctggaaagcagcgatttg
gatcagtaccgcgcactgctggcgaaaatccagccatctgctgaaggcgaagagctggat
gttgaaactctggccgcagcgctgctgaaaatggctcagggtgaacgtccgctgatcctg
cctccggatgcgccgatgcgtccgaagcgtgagttccgtgaccgtgacgatcgtttcgag
cgtcgtggcgaccgcaacgatcgtggcccgcgcggtgatcgccctgaacgcagtggcgaa
gatcgtcctaagcgtgagcgtcgtgacgttggcgatatggaactgtaccgtattgaagtg
ggccgtgatgatggcgttgaagttcgtcatatcgttggcgcgattgctaacgaaggcgat
atcagcagccgttacatcggtaacattaagctgtttgcttctcactccaccatcgagctg
ccgaaaggcatgccgggtgaagtactgcagcactttactcgtactcgcattctgaacaaa
ccgatgaacatgcagctgctgggtgatgctcagccgcgtcctgagcgcagcggcgaacgt
cgcggcggcggcgagcgtcgtgaaggcggtcgtggtttcggtggcggtgagcgtcgtgaa
agccgtgggtttggcggcgaacgccgtgaaggtggtcgtggtgatggtcgtcgtttcagc
ggcgagcgtcgtgacggtggtaaccgcgcaccgcgccgcgatgatgccggtgctgctccg
cgtcgtgatgactccgcaggccgtcgtcgtttcggtggcgatgcgtaa
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